ENST00000298919.7 PDZRN4

Information
Transcript ID
ENST00000298919.7
Genome
hg38
Position
chr12:41,437,739-41,574,582
Strand
+
CDS length
2,331
Amino acid length
777
Gene symbol
PDZRN4
Gene type
protein-coding
Gene description
PDZ domain containing ring finger 4
Gene Entrez Gene ID
29951
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 41,437,739 41,438,013
2 41,459,951 41,460,070
3 41,477,865 41,477,920
4 41,506,456 41,506,712
5 41,509,811 41,509,913
6 41,552,656 41,552,754
7 41,555,698 41,555,760
8 41,563,548 41,563,649
9 41,567,783 41,567,899
10 41,572,364 41,574,582
CDS
Exon number Type Start Stop
2 CDS 41,460,064 41,460,070
3 CDS 41,477,865 41,477,920
4 CDS 41,506,456 41,506,712
5 CDS 41,509,811 41,509,913
6 CDS 41,552,656 41,552,754
7 CDS 41,555,698 41,555,760
8 CDS 41,563,548 41,563,649
9 CDS 41,567,783 41,567,899
10 CDS 41,572,364 41,573,890
Other genome
Genome Chromosome Start End Links
hg19 chr12 41,831,541 41,968,384 Link
CDS sequence
ATGAGTGGTAAGAGACAATTTTTCCTTAAACCTTTGGCATTGTTGACATGTTGGCCATCCACTGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGCAATGCCAAGGAGCCCATTGTGGTGCAGGTGTTAAGGCGAACACCTCTTAGTAGACCAGCCTATGGGATGGCTTCAGAAGTGCAGCTTATGAATGCCAGCACTCAGACGGACATCACCTTCGAACACATCATGGCTCTGGCCAAGCTTCGTCCACCTACCCCTCCAGTGCCAGACATCTGTCCATTCCTGCTCTCAGACAGCTGCCATTCTCTACATCCAATGGAGCATGAATTTTATGAGGACAATGAGTATATTTCCAGCTTGCCTGCTGATGCAGACAGAACAGAAGACTTTGAATATGAGGAGGTCGAGTTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCTGACAGTCTGTTACCGAACAGATGATGAAGAAGACACCGGCATTTATGTCAGCGAGGTTGACCCAAATAGCATTGCTGCCAAAGACGGCCGGATTCGAGAAGGGGATCGGATTTTGCAAATAAATGGGGAAGATGTCCAGAATCGAGAAGAAGCAGTGGCCTTGCTGTCTAACGATGAGTGTAAGAGAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAGCTGGATGAAGGCTGGCTGGAAGATGAAAGGAATGAATTCTTAGAGGAGTTAAACTTGGAGATGTTGGAAGAAGAGCATAATGAAGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGCCAAAAAAGCAAGAAGAAGAAGAAGGCACAACAGACACTGCAACATCCTCATCCAACAACCATGAGAAGGACAGTGGAGTAGGACGTACAGATGAAAGCTTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGTGTTGAACTTCAGTACAATGAGAGCCTCGTATCTGGTGAATACATTGACTCAGACTGCATTGGCAACCCAGATGAGGACTGTGAAAGATTCAGGCAGCTCTTGGAGCTCAAATGCAAGATTCGAAATCATGGAGAGTATGACCTGTATTACTCAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAGAGGGAGTGGAGCATGAGCTACAGTTGCTTAATGAAGAACTGAGAAACATTGAGCTTGAGTGTCAGAATATCATGCAGGCTCACAGGCTCCAGAAAGTGACAGACCAGTATGGAGACATCTGGACATTGCATGATGGAGGATTCCGGAATTATAACACCAGCATAGATATGCAAAGGGGAAAGCTAGATGACATCATGGAGCATCCAGAAAAGTCTGACAAGGACAGTTCTAGTGCTTACAACACAGCTGAGAGCTGCAGAAGTACTCCGCTCACTGTAGACCGTTCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATCAAGAGAAGGCAGTCAGCGAACACATCCCTTACCTCTCTCCTTACCACAGCTCCTCATATAGATATGCAAACATCCCAGCACACGCCCGGCATTATCAAAGCTACATGCAGTTAATTCAACAGAAATCTGCAGTCGAGTATGCTCAGAGTCAGCTCAGCTTGGTGAGCATGTGCAAGGAGTCTCAGAAGTGTTCAGAGCCCAAGATGGAATGGAAGGTGAAAATTAGGAGCGACGGGACACGGTACATCACAAAGAGACCCGTGCGAGACCGAATCCTGAAGGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTGGCATGACCACAGACGATGACACCATGAGCGAGATGAAAATGGGGCGCTACTGGAGCAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGCCAAAGAGCAGCGCCGTCGCCGTGAGTTCATGATGCGAAGCAGGTTAGAGTGTCTCAAGGAGAGCCCTCAGAGCGGCAGTGAGGGCAAGAAGGAGATCAATATCATTGAACTGAGTCACAAAAAGATGATGAAAAAGAGAAACAAGAAAATTTTGGACAACTGGATGACAATCCAAGAACTGATGACCCATGGGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATGCCTTCTTGTCGGTGACCACTGTATGA
Amino sequence
MSGKRQFFLKPLALLTCWPSTVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHSLHPMEHEFYEDNEYISSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSNDECKRIVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEEHNEAMQPTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSKRDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDCERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWTLHDGGFRNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSAESKEKVLEGSKLPDQEKAVSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV*