chr3:114162776:A>G Detail (hg38) (DRD3)
Information
Genome
Assembly | Position |
---|---|
hg19 | chr3:113,881,623-113,881,623 View the variant detail on this assembly version. |
hg38 | chr3:114,162,776-114,162,776 |
HGVS
Type | Transcript | Protein |
---|---|---|
RefSeq | NM_033663.5:c.271-2909T>C | |
NM_000796.5:c.271-2909T>C | ||
NM_001282563.2:c.271-2909T>C |
Summary
MGeND
Clinical significance | |
Variant entry | |
GWAS entry | |
Disease area statistics | Show details |
Frequency
JP | HGVD:[No Data.] |
ToMMo:0.739 | |
NCBN:[No Data.] | |
NCBN(Hondo):[No Data.] | |
NCBN(Ryukyu):[No Data.] | |
East asia | ExAC:[No Data.] |
Prediction
ClinVar
Clinical Significance | |
Review star | [No Data.] |
Show details |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score | Disease name | Description | Source | Pubmed | Links |
---|---|---|---|---|---|
<0.001 | heroin dependence | The GTA haplotype frequency in the block (rs324029, rs6280, rs9825563) was signi... | BeFree | 24398431 | Detail |
Annotation
Annotations
Descrption | Source | Links |
---|---|---|
The GTA haplotype frequency in the block (rs324029, rs6280, rs9825563) was significantly associated ... | DisGeNET | Detail |
Overlapped Transcript
Gene | Transcript ID | Chromosome | Start | Stop | Links |
---|
- Gene
- -
- dbSNP
- rs324029 dbSNP
- Genome
- hg38
- Position
- chr3:114,162,776-114,162,776
- Variant Type
- snv
- Reference Allele
- A
- Alternative Allele
- G
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs324029
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.7394
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 12393
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
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