chr22:25588025:C>T Detail (hg38) (GRK3)

Information

Genome

Assembly Position
hg19 chr22:25,983,992-25,983,992 View the variant detail on this assembly version.
hg38 chr22:25,588,025-25,588,025

HGVS

Type Transcript Protein
RefSeq NM_005160.3:c.114-16352C>T
Ensemble ENST00000324198.11:c.114-16352C>T
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Type Database ID Link
Gene MIM 109636 OMIM
HGNC 290 HGNC
Ensembl ENSG00000100077 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.008 Malignant neoplasm of urinary bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
0.004 Carcinoma of bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
0.129 Malignant neoplasm of urinary bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
0.007 Carcinoma of bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
0.012 Malignant neoplasm of urinary bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
0.123 Malignant neoplasm of urinary bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
<0.001 Carcinoma of bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
0.003 Carcinoma of bladder In the meta-analysis, the reported risk allele for four SNPs were significantly ... BeFree 22711262 Detail
Annotation

Annotations

DescrptionSourceLinks
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail
In the meta-analysis, the reported risk allele for four SNPs were significantly associated with incr... DisGeNET Detail

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs9624880 dbSNP
Genome
hg38
Position
chr22:25,588,025-25,588,025
Variant Type
snv
Reference Allele
C
Alternative Allele
T
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