chr17:58279366:A>G Detail (hg38) (MPO)

Information

Genome

Assembly Position
hg19 chr17:56,356,727-56,356,727 View the variant detail on this assembly version.
hg38 chr17:58,279,366-58,279,366

HGVS

Type Transcript Protein
RefSeq NM_000250.1:c.609T>C NP_000241.1:p.Tyr203=
Ensemble ENST00000225275.4:c.609T>C ENST00000225275.4:p.Tyr203=
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:[No Data.]
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:<0.001

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Type Database ID Link
Gene MIM 606989 OMIM
HGNC 7218 HGNC
Ensembl ENSG00000005381 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
<0.001 Exanthema Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Spots on skin Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Exanthema Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Exanthema Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Spots on skin Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Spots on skin Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Exanthema Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Exanthema Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
0.001 Spots on skin Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Spots on skin Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
0.001 Exanthema Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Spots on skin Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Exanthema Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
<0.001 Spots on skin Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transfera... BeFree 14716779 Detail
0.002 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
<0.001 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
0.012 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
0.003 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
<0.001 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
0.124 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
0.002 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
<0.001 Non-small cell lung carcinoma The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (nu... BeFree 16157195 Detail
Annotation

Annotations

DescrptionSourceLinks
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
Genotyping for glutathione S-transferase micro1 (GSTM1), glutathione S-transferase theta1 (GSTT1), m... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail
The genotypes at polymorphic sites of the glutathione S-transferase (GST) M1 (null/wildtype) and P1 ... DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
Genome
hg38
Position
chr17:58,279,366-58,279,366
Variant Type
snv
Reference Allele
A
Alternative Allele
G
East Asian Chromosome Counts (ExAC)
2688
East Asian Allele Counts (ExAC)
0
East Asian Heterozygous Counts (ExAC)
0
East Asian Homozygous Counts (ExAC)
0
East Asian Allele Frequency (ExAC)
0.0
Chromosome Counts in All Race (ExAC)
38278
Allele Counts in All Race (ExAC)
1
Heterozygous Counts in All Race (ExAC)
1
Homozygous Counts in All Race (ExAC)
0
Allele Frequency in All Race (ExAC)
2.6124666910496892E-5
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