chr16:2079674:G>A Detail (hg38) (TSC2)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr16:2,129,675-2,129,675 View the variant detail on this assembly version.
hg38	chr16:2,079,674-2,079,674

HGVS

TSC2

Type	Transcript	Protein
RefSeq	NM_000548.4:c.3397+5G>A
	NM_001114382.2:c.3397+5G>A
	NM_001318829.1:c.3121+5G>A
	NM_001077183.2:c.3265+5G>A
	NM_001318827.1:c.3157+5G>A
	NM_001318831.1:c.3157+5G>A
	NM_001318832.1:c.3298+5G>A
Ensemble	ENST00000219476.9:c.3397+5G>A
	ENST00000350773.9:c.3397+5G>A
	ENST00000382538.10:c.3121+5G>A
	ENST00000401874.7:c.3265+5G>A
	ENST00000439673.6:c.3157+5G>A
	ENST00000568454.6:c.3298+5G>A
	ENST00000642206.2:c.3313+5G>A
	ENST00000642365.2:c.3394+5G>A
	ENST00000642561.1:c.3268+5G>A
	ENST00000642797.1:c.3268+5G>A
	ENST00000642936.1:c.3265+5G>A
	ENST00000643088.1:c.3265+5G>A
	ENST00000643946.1:c.3397+5G>A
	ENST00000644043.1:c.3268+5G>A
	ENST00000644329.1:c.3265+5G>A
	ENST00000644335.1:c.3268+5G>A
	ENST00000645186.2:c.3397+5G>A
	ENST00000646388.1:c.3397+5G>A

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Conflicting classifications of pathogenicity
Review star
Show details

Links

TSC2

Type	Database	ID	Link
Gene	MIM	191092	OMIM
	HGNC	12363	HGNC
	Ensembl	ENSG00000103197	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
not provided		no assertion provided	Tuberous sclerosis syndrome	germline	Detail
Pathogenic	2015-01-16	criteria provided, single submitter	not provided	germline	Detail
Uncertain significance	2022-06-19	criteria provided, single submitter	tuberous sclerosis 2	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.494	tuberous sclerosis	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000548.5(TSC2):c.3397+5G>A AND Tuberous sclerosis syndrome	ClinVar	Detail
NM_000548.5(TSC2):c.3397+5G>A AND not provided	ClinVar	Detail
NM_000548.5(TSC2):c.3397+5G>A AND Tuberous sclerosis 2	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs45501492 dbSNP
Genome: hg38
Position: chr16:2,079,674-2,079,674
Variant Type: snv
Reference Allele: G
Alternative Allele: A

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