chr3:178952074:G>A Detail (hg19) (PIK3CA)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr3:178,952,074-178,952,074 |
| hg38 | chr3:179,234,286-179,234,286 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_006218.3:c.3129G>A | NP_006209.2:p.Met1043Ile |
| Ensemble | ENST00000263967.4:c.3129G>A | ENST00000263967.4:p.Met1043Ile |
| ENST00000643187.1:c.*209G>A |
Summary
MGeND
| Clinical significance |
not provided
|
| Variant entry | 7 |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
ClinVar
| Clinical Significance |
Pathogenic
Likely pathogenic
|
| Review star |  |
| Show details | |
Disease area statistics
MGeND
| Clinical significance | Last evaluated | Condition | Origin | Submission ID | Submitter | Institute | Citation | Comment | Image |
|---|---|---|---|---|---|---|---|---|---|
|
not provided
|
fundus of stomach |
not provided
|
MGS000041
(TMGS000094) |
Hitoshi Nakagama | National Cancer Center Japan | ||||
|
not provided
|
ill-defined sites within the digestive system |
not provided
|
MGS000041
(TMGS000094) |
Hitoshi Nakagama | National Cancer Center Japan | ||||
|
not provided
|
pyloric antrum |
not provided
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | ||||
|
not provided
|
malignant neoplasm of rectum |
not provided
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | ||||
|
not provided
|
body of pancreas |
not provided
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | ||||
|
not provided
|
Tumors of unknown primary site |
somatic
|
MGS000018
(TMGS000110) |
Hitoshi Nakagama | National Cancer Center Japan |
30742731
|
|||
|
not provided
|
bronchus or lung, unspecified |
not provided
|
MGS000042
(TMGS000093) |
Hitoshi Nakagama | National Cancer Center Japan |
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
Likely pathogenic
|
2013-07-19 | criteria provided, single submitter | Non-small cell lung carcinoma |
somatic
|
Detail |
|
Pathogenic
|
2015-01-20 | no assertion criteria provided | PIK3CA related overgrowth syndrome |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | Malignant neoplasm of body of uterus |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | Breast neoplasm |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | Squamous cell carcinoma of the head and neck |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | pancreatic adenocarcinoma |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | Neoplasm of brain |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | Neoplasm of the large intestine |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | gastric adenocarcinoma |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | glioblastoma |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | adenoid cystic carcinoma |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided | Thyroid tumor |
somatic
|
Detail |
|
Likely pathogenic
|
2016-05-31 | no assertion criteria provided |
somatic
|
Detail | |
|
Pathogenic
|
2022-07-05 | criteria provided, single submitter | Cowden syndrome |
germline
|
Detail |
|
Pathogenic
|
criteria provided, single submitter | Megalencephaly-capillary malformation-polymicrogyria syndrome |
somatic
|
Detail | |
|
Pathogenic
|
2022-10-20 | criteria provided, single submitter | not provided |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.137 | Non-small cell lung carcinoma | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Non-small cell lung carcinoma | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND PIK3CA related overgrowth syndrome | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Malignant neoplasm of body of uterus | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Breast neoplasm | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Squamous cell carcinoma of the head and neck | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Pancreatic adenocarcinoma | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Neoplasm of brain | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Neoplasm of the large intestine | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Gastric adenocarcinoma | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Glioblastoma | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Adenoid cystic carcinoma | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Thyroid tumor | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Transitional cell carcinoma of the bladder | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Cowden syndrome | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND Megalencephaly-capillary malformation-polymicrogyri... | ClinVar | Detail |
| NM_006218.4(PIK3CA):c.3129G>A (p.Met1043Ile) AND not provided | ClinVar | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs121913283 dbSNP
- Genome
- hg19
- Position
- chr3:178,952,074-178,952,074
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
Genome browser