chr13:32921033:G>T Detail (hg19) (BRCA2)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr13:32,921,033-32,921,033
hg38	chr13:32,346,896-32,346,896 View the variant detail on this assembly version.

HGVS

BRCA2

Type	Transcript	Protein
RefSeq	NM_000059.3:c.7007G>T	NP_000050.2:p.Arg2336Leu
Ensemble	ENST00000380152.8:c.7007G>T	ENST00000380152.8:p.Arg2336Leu
	ENST00000530893.7:c.6638G>T	ENST00000530893.7:p.Arg2213Leu
	ENST00000544455.6:c.7007G>T	ENST00000544455.6:p.Arg2336Leu
	ENST00000700202.2:c.7007G>T	ENST00000700202.2:p.Arg2336Leu
	ENST00000713678.1:c.7007G>T	ENST00000713678.1:p.Arg2336Leu
	ENST00000713680.1:c.7007G>T	ENST00000713680.1:p.Arg2336Leu

Summary

MGeND

Clinical significance	Likely pathogenic
Variant entry	1
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic Likely pathogenic
Review star
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Links

BRCA2

Type	Database	ID	Link
Gene	MIM	600185	OMIM
	HGNC	1101	HGNC
	Ensembl	ENSG00000139618	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

MGeND

Clinical significance	Last evaluated	Condition	Origin	Submission ID	Submitter	Institute	Citation	Comment	Image
Likely pathogenic	2020/04/20	bronchus or lung, unspecified	not provided	MGS000042 (TMGS000093)	Hitoshi Nakagama	National Cancer Center Japan

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Likely pathogenic	2023-11-18	criteria provided, single submitter	hereditary breast ovarian cancer syndrome	germline	Detail
Pathogenic Likely pathogenic	2023-10-02	criteria provided, multiple submitters, no conflicts	Breast-ovarian cancer, familial, susceptibility to, 2	germline somatic	Detail
Likely pathogenic	2023-08-23	criteria provided, multiple submitters, no conflicts	Hereditary cancer-predisposing syndrome	germline	Detail
Likely pathogenic	2021-04-06	criteria provided, single submitter	not provided	unknown	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.240	Breast-ovarian cancer, familial, susceptibility to, 2	NA	CLINVAR		Detail
0.174	Breast Cancer, Familial	NA	CLINVAR		Detail
0.391	Hereditary Breast and Ovarian Cancer Syndrome	NA	CLINVAR		Detail
0.128	Neoplastic Syndromes, Hereditary	NA	CLINVAR		Detail
0.560	FANCONI ANEMIA, COMPLEMENTATION GROUP D1	Clinical and molecular features associated with biallelic mutations in FANCD1/BR...	UNIPROT	16825431	Detail

Annotation

Annotations

Descrption	Source	Links
NM_000059.4(BRCA2):c.7007G>T (p.Arg2336Leu) AND Hereditary breast ovarian cancer syndrome	ClinVar	Detail
NM_000059.4(BRCA2):c.7007G>T (p.Arg2336Leu) AND Breast-ovarian cancer, familial, susceptibility to, ...	ClinVar	Detail
NM_000059.4(BRCA2):c.7007G>T (p.Arg2336Leu) AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NM_000059.4(BRCA2):c.7007G>T (p.Arg2336Leu) AND not provided	ClinVar	Detail
NA	DisGeNET	Detail
NA	DisGeNET	Detail
NA	DisGeNET	Detail
NA	DisGeNET	Detail
Clinical and molecular features associated with biallelic mutations in FANCD1/BRCA2.	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs28897743 dbSNP
Genome: hg19
Position: chr13:32,921,033-32,921,033
Variant Type: snv
Reference Allele: G
Alternative Allele: T

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