chr1:43396718:G>A Detail (hg19) (SLC2A1)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr1:43,396,718-43,396,718 |
| hg38 | chr1:42,931,047-42,931,047 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_006516.2:c.274C>T | NP_006507.2:p.Arg92Trp |
| Ensemble | ENST00000426263.10:c.274C>T | ENST00000426263.10:p.Arg92Trp |
| ENST00000674765.1:c.274C>T | ENST00000674765.1:p.Arg92Trp |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
ClinVar
| Clinical Significance |
Pathogenic
Likely pathogenic
|
| Review star |  |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
Pathogenic
|
2009-08-15 | no assertion criteria provided | Childhood onset GLUT1 deficiency syndrome 2 |
germline
|
Detail |
|
Pathogenic
|
2024-02-01 | criteria provided, multiple submitters, no conflicts | not provided |
germline
|
Detail |
|
Pathogenic
|
2022-12-02 | criteria provided, single submitter | GLUT1 deficiency syndrome 1, autosomal recessive |
germline
|
Detail |
|
Likely pathogenic
|
2019-02-13 | criteria provided, single submitter | intellectual disability |
unknown
|
Detail |
|
Likely pathogenic
|
2021-11-19 | criteria provided, single submitter | Developmental disorder |
maternal
|
Detail |
|
Pathogenic
|
2022-05-13 | criteria provided, single submitter | Childhood onset GLUT1 deficiency syndrome 2,Encephalopathy due to GLUT1 deficiency |
de novo
|
Detail |
|
Pathogenic
|
2022-05-13 | criteria provided, single submitter | Childhood onset GLUT1 deficiency syndrome 2,Encephalopathy due to GLUT1 deficiency |
de novo
|
Detail |
|
Likely pathogenic
|
2023-04-11 | criteria provided, single submitter | Encephalopathy due to GLUT1 deficiency |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.481 | DYSTONIA 18 (disorder) | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND Childhood onset GLUT1 deficiency syndrome 2 | ClinVar | Detail |
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND not provided | ClinVar | Detail |
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND GLUT1 deficiency syndrome 1, autosomal recessive | ClinVar | Detail |
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND Intellectual disability | ClinVar | Detail |
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND Developmental disorder | ClinVar | Detail |
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND multiple conditions | ClinVar | Detail |
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND multiple conditions | ClinVar | Detail |
| NM_006516.4(SLC2A1):c.274C>T (p.Arg92Trp) AND Encephalopathy due to GLUT1 deficiency | ClinVar | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs202060209 dbSNP
- Genome
- hg19
- Position
- chr1:43,396,718-43,396,718
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
Genome browser