NC_000015.9:g.(?_32964879)_(91358519_?)dup AND Familial colorectal cancer Detail (hg19) (ACTC1, ADAM10, ACAN, ANPEP, ANXA2, AQP9, B2M, BBS4, BCL2A1, BLM, BNC1, BNIP2, BUB1B, CA12, CAPN3, CHRM5, CHRNA3, CHRNA5, CHRNB4, CKMT1B, CLK3, CRABP1, CSK, CSPG4, CTSH, CYP1A1, CYP1A2, CYP11A1, CYP19A1, DUT, EPB42, ETFA, FAH, FBN1, FGF7, GABPB1, GALK2, GANC, GATM, GCHFR, PDIA3, GTF2A2, HDC, HEXA, ONECUT1, IDH2, IDH3A, IL16, IREB2, ISG20, ISLR, ITPKA, IVD, LIPC, LOXL1, LTK, SMAD3, SMAD6, MAN2C1, MAP1A, MEIS2, MFAP1, MFGE8, MPI, MYO1E, MYO5A, MYO9A, NEDD4, NEO1, NMB, NTRK3, OAZ2, PDE8A, PKM, PLCB2, PLIN1, PML, POLG, PPIB, MAPK6, MAP2K1, MAP2K5, PSMA4, PTPN9, RAB27A, RAD51, RASGRF1, RCN2, RLBP1, RORA, RPL4, RPLP1, RPS17, RYR3, SCG5, SH3GL3, SLC12A1, SNX1, SORD, SPINT1, SRP14, TCF12, THBS1, TLE3, TP53BP1, TPM1, TYRO3, SLC30A4, AP3B2, ANP32A, SEMA7A, CILP, PIAS1, EIF3J, RAB11A, SNAP23, PEX11A, IQGAP1, ALDH1A2, HERC1, PSTPIP1, USP8, CCNB2, SLC28A2, SLC28A1, SLC24A1, CCPG1, GCNT3, COPS2, TRIP4, TGM5, COX5A, STOML1, HOMER2, PIGB, KIF23, IGDCC3, ZNF592, PPIP5K1, AQR, SECISBP2L, PCLAF, LCMT2, ARNT2, USP3, SLC12A6, NR2E3, BCL2L10, HCN4, SCAMP2, SNUPN, PDCD7, TSPAN3, FEM1B, RASGRP1, SERF2, AP3S2, DENND4A, SNAPC5, HMG20A, CORO2B, SEMA4B, CIB2, CIB1, MTHFS, ARID3B, GNB5, ARPP19, CLPX, MORF4L1, SLC27A2, ABHD2, ADAMTS7, AKAP13, GPR176, CHP1, OIP5, ITGA11, BAHD1, CEP152, MAPKBP1, GOLGA8A, ZNF609, TBC1D2B, RTF1, MESD, ACSBG1, MINAR1, MGA, DMXL2, VPS39, TMED3, AP4E1, SEC11A, CCNDBP1, DAPK2, EID1, HYPK, ARIH1, SIN3A, TMEM87A, ULK3, RPAP1, GLCE, PYGO1, BLOC1S6, FBXO22, GREM1, MRPL46, RNU6-1, RNU5A-1, NPTN, FOXB1, RPUSD2, TUBGCP4, SCG3, TMOD3, TMOD2, EHD4, SCAPER, DUOX2, MYEF2, RPS27L, NDUFAF1, RSL24D1, NUSAP1, EMC4, RASL12, SPG21, SPTBN5, NGRN, RHCG, HACD3, CTDSPL2, RAB8B, BTBD1, TM6SF1, DUOX1, CSNK1G1, ZFAND6, DLL4, INO80, MINDY2, RNF111, ZNF280D, TRPM7, VPS13C, LRRC49, PAQR5, PPP1R14D, DPP8, RPP25, COMMD4, PARP16, TIPIN, CLN6, ZNF770, ZSCAN2, ZWILCH, DET1, UACA, HAUS2, RMDN3, DNAJC17, FANCI, IMP3, LARP6, MNS1, DNAJA4, NOP10, GOLGA6B, MESP1, MYO5C, ATOSA, EMC7, C15orf39, THAP10, PAK6, WDR93, PARP6, DTWD1, KNL1, AVEN, FAM219B, ADAMTSL3, CEMIP, GJD2, STARD9, ALPK3, ISLR2, VPS18, IGDCC4, SQOR, ABHD17C, TLNRD1, PPCDC, CELF6, STRA6, ZNF106, KLHL25, CPEB1, AEN, CRTC3, IQCH, ISL2, RFX7, MRPS11, AFG2B, CHAC1, NOX5, EFL1, NEIL1, ICE2, AAGAB, LMAN1L, KATNBL1, SLTM, PEAK1, SNX22, THSD4, ATP8B4, WDR76, TMEM62, SEMA6D, PIF1, CCDC33, EDC3, SPG11, ELL3, PLEKHO2, SKIC8, CD276, STARD5, POLR2M, INTS14, ADPGK, APH1B, RAMAC, TLN2, CIAO2A, MEX3B, C15orf48, MEGF11, CDIN1, SPPL2A, LINGO1, ZFYVE19, WDR73, CGNL1, FRMD5, UBL7, DISP2, DPH6, TICRR, CCDC32, KNSTRN, BMF, SHF, DUOXA1, CALML4, LDHAL6B, UBE2Q2, CHST14, GOLM2, LACTB, DIS3L, TGM7, CATSPER2, LEO1, C15orf40, SENP8, MTFMT, SLC51B, TMEM266, AGBL1, HYKK, WHAMM, FSD2, PLA2G4E, TRIM69, TERB2, C2CD4A, FAM81A, PIERCE2, C15orf61, HAPLN3, MESP2, TMCO5A, NRG4, ZSCAN29, TTBK2, CDAN1, STRC, CFAP161, TBC1D21, DNAAF4, SPRED1, CIMAP1C, PGBD4, ADAL, EXD1, FSIP1, RHOV, SCAMP5, FAM227B, CT62, GRAMD2A, LCTL, UBR1, PATL2, SPESP1, LPCAT4, PLA2G4F, LRRC57, LYSMD2, NUTM1, WDR72, SNX33, SLC24A5, PRTG, REC114, SAXO2, FAM98B, PLA2G4D, LINC00928, FBXL22, TMEM202, GLDN, GOLGA6A, TMC3, ZNF774, RBPMS2, ANKDD1A, ARPIN, USP50, TEX9, KIF7, ZNF710, CCDC9B, TNFAIP8L3, C2CD4B, INSYN1, KBTBD13, UBAP1L, SKOR1, ANKRD34C, GDPGP1, SHC4, CTXN2, LINC02694, LINC02915, ST20, DUOXA2, MIR184, MIR9-3, GOLGA8B, EIF2AK4, UNC13C, CKMT1A, CPLX3, SERINC4, C15orf62, PAK6-AS1, PHGR1, SH2D7, GOLGA6C, GOLGA6D, SCARNA15, ANKRD63, JMJD7, PLA2G4B, ARPIN-AP3S2, ST20-MTHFS, MYZAP)

Information

Genome

Assembly Position
hg19 chr15:32,964,879-91,358,519
hg38 chr15:32,672,678-90,815,289 
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

ClinVar

Clinical Significance Uncertain significance
Review star
Show details
Links
Type Database ID Link
Gene MIM
HGNC
Ensembl
NCBI
Gene Cards
OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Uncertain significance 2020-02-06 criteria provided, single submitter Familial colorectal cancer germline Detail
Uncertain significance 2020-02-06 criteria provided, single submitter Bloom syndrome germline Detail
CIViC
[No Data.]
DisGeNET
[No Data.]
Annotation

Annotations

DescrptionSourceLinks
NC_000015.9:g.(?_32964879)_(91358519_?)dup AND Familial colorectal cancer ClinVar Detail
NC_000015.9:g.(?_32964879)_(91358519_?)dup AND Bloom syndrome ClinVar Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
Genome
hg19
Position
chr15:32,964,879-91,358,519
Variant Type
cnv
Genome browser