chr6:52750087:> Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr6:52,614,885-52,628,273 |
| hg38 | chr6:52,750,087-52,763,475 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.005 | Esophageal Neoplasms | NA | GAD | Detail | |
| 0.005 | Head and Neck Neoplasms | NA | GAD | Detail | |
| <0.001 | ischemia | NA | BeFree | Detail | |
| 0.005 | Laryngeal neoplasm | NA | GAD | Detail | |
| 0.002 | chronic lymphocytic leukemia | NA | GAD | Detail | |
| 0.120 | Liver Cirrhosis, Experimental | NA | CTD_human | Detail | |
| 0.002 | Mesothelioma | NA | GAD | Detail | |
| 0.005 | Mouth Neoplasms | NA | GAD | Detail | |
| 0.005 | Pharyngeal Neoplasms | NA | GAD | Detail | |
| 0.002 | Pleural Neoplasms | NA | GAD | Detail | |
| 0.005 | Malignant neoplasm of lung | Heterozygote carriers of SNPs in CYP1A2 1545T>C, -164C>A and -740T>G; C... | BeFree | 17259654 | Detail |
| <0.001 | Carcinoma of lung | Heterozygote carriers of SNPs in CYP1A2 1545T>C, -164C>A and -740T>G; C... | BeFree | 17259654 | Detail |
| 0.005 | Malignant neoplasm of lung | NA | BeFree,GAD | Detail | |
| 0.002 | Malignant neoplasm of prostate | NA | GAD | Detail | |
| 0.002 | Malignant neoplasm of esophagus | NA | GAD | Detail | |
| <0.001 | breast carcinoma | NA | BeFree | Detail | |
| <0.001 | Carcinoma of lung | NA | BeFree | Detail | |
| 0.002 | Genomic Instability | NA | GAD | Detail | |
| 0.002 | colorectal cancer | NA | GAD | Detail | |
| 0.003 | Malignant neoplasm of breast | NA | BeFree,GAD | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Heterozygote carriers of SNPs in CYP1A2 1545T>C, -164C>A and -740T>G; CYP2A6 -47A>C; MDR... | DisGeNET | Detail |
| Heterozygote carriers of SNPs in CYP1A2 1545T>C, -164C>A and -740T>G; CYP2A6 -47A>C; MDR... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs386545618 dbSNP
- Genome
- hg38
- Position
- chr6:52,750,087-52,763,475
- Variant Type
- snv
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