chr6:28503296:> Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr6:28,471,073-28,483,570 |
| hg38 | chr6:28,503,296-28,515,793 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | Huntington disease | Synthetic lethal screening in the mammalian central nervous system identifies Gp... | BeFree | 25535386 | Detail |
| <0.001 | Hearing Loss, Mixed Conductive-Sensorineural | NA | BeFree | Detail | |
| 0.002 | Malignant neoplasm of lung | NA | GAD | Detail | |
| 0.120 | Epithelial ovarian cancer | Variants at 1p36 (nearest gene, WNT4), 4q26 (SYNPO2), 9q34.2 (ABO) and 17q11.2 (... | BeFree,CTD_human | 25581431 | Detail |
| <0.001 | Malignant neoplasm of breast | The gene-gene interactions demonstrated a significant four-variant interaction a... | BeFree | 25416100 | Detail |
| <0.001 | breast carcinoma | The gene-gene interactions demonstrated a significant four-variant interaction a... | BeFree | 25416100 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Synthetic lethal screening in the mammalian central nervous system identifies Gpx6 as a modulator of... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Variants at 1p36 (nearest gene, WNT4), 4q26 (SYNPO2), 9q34.2 (ABO) and 17q11.2 (ATAD5) were associat... | DisGeNET | Detail |
| The gene-gene interactions demonstrated a significant four-variant interaction among rs406113 (GPX6)... | DisGeNET | Detail |
| The gene-gene interactions demonstrated a significant four-variant interaction among rs406113 (GPX6)... | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs105213 dbSNP
- Genome
- hg38
- Position
- chr6:28,503,296-28,515,793
- Variant Type
- snv
Genome browser