chr12:102155361:T> Detail (hg19) (GNPTAB)

Information

Genome

Assembly Position
hg19 chr12:102,155,361-102,155,361
hg38 chr12:101,761,583-101,761,583 

HGVS

Type Transcript Protein
RefSeq NM_024312.4:c.2896delA NP_077288.2:p.Met966CysfsTer37
Ensemble ENST00000299314.12:c.2896delA ENST00000299314.12:p.Met966CysfsTer37
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 607840 OMIM
HGNC 29670 HGNC
Ensembl ENSG00000111670 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic 2012-12-11 criteria provided, single submitter not provided germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.441 MUCOLIPIDOSIS II ALPHA/BETA (disorder) NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_024312.5(GNPTAB):c.2896del (p.Met966fs) AND not provided ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs398124398 dbSNP
Genome
hg19
Position
chr12:102,155,361-102,155,361
Variant Type
snv
Reference Allele
T
Alternative Allele
-
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