ENST00000705719.1 NPLOC4

Information
Transcript ID
ENST00000705719.1
Genome
hg38
Position
chr17:81,556,887-81,637,112
Strand
-
CDS length
1,956
Amino acid length
652
Gene symbol
NPLOC4
Gene type
protein-coding
Gene description
NPL4 homolog, ubiquitin recognition factor
Gene Entrez Gene ID
55666
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
17 81,556,887 81,559,416
16 81,565,505 81,565,607
15 81,567,417 81,567,533
14 81,569,016 81,569,111
13 81,572,017 81,572,088
12 81,588,944 81,589,104
11 81,596,116 81,596,242
10 81,597,245 81,597,316
9 81,600,341 81,600,427
8 81,604,548 81,604,727
7 81,606,691 81,606,814
6 81,608,728 81,608,822
5 81,610,210 81,610,258
4 81,613,318 81,613,494
3 81,622,166 81,622,278
2 81,629,725 81,629,805
1 81,636,916 81,637,112
CDS
Exon number Type Start Stop
17 CDS 81,559,259 81,559,416
16 CDS 81,565,505 81,565,607
15 CDS 81,567,417 81,567,533
14 CDS 81,569,016 81,569,111
13 CDS 81,572,017 81,572,088
12 CDS 81,588,944 81,589,104
11 CDS 81,596,116 81,596,242
10 CDS 81,597,245 81,597,316
9 CDS 81,600,341 81,600,427
8 CDS 81,604,548 81,604,727
7 CDS 81,606,691 81,606,814
6 CDS 81,608,728 81,608,822
5 CDS 81,610,210 81,610,258
4 CDS 81,613,318 81,613,494
3 CDS 81,622,166 81,622,278
2 CDS 81,629,725 81,629,805
1 CDS 81,636,916 81,637,059
Other genome
Genome Chromosome Start End Links
hg19 chr17 79,523,913 79,604,138 Link
CDS sequence
CTGGAGCGGCGGTGGCGGCGGCGTAGGGAGGCCGGGGCCGGGGCTGAGGCCGCGGCCGGGTCTGCGAGGCCCTTGGGGCGGCAGGCGGCGGCGGCCCGGGGCTCGAGCCCGGAGGCAGGAGCAGCCGCCATGGCCGAGAGCATCATAATTCGTGTCCAGTCCCCGGATGGAGTGAAGCGGATCACAGCAACAAAGAGAGAAACAGCAGCAACATTTTTGAAAAAGGTTGCAAAGGAGTTTGGCTTCCAAAATAATGGCTTCTCGGTTTACATCAATAGAAACAAGACCGGAGAGATAACAGCCTCCTCCAACAAATCCCTCAACTTGCTAAAAATCAAGCATGGCGATTTGTTGTTCCTGTTTCCCTCGAGCCTTGCTGGGCCCTCATCTGAAATGGAGACGTCAGTTCCACCGGGCTTCAAAGTCTTTGGCGCTCCCAACGTGGTGGAGGATGAGATTGATCAGTACCTCAGCAAACAGGACGGGAAGATTTACAGAAGCCGAGACCCACAGCTATGCCGCCACGGCCCTTTGGGGAAATGCGTGCACTGCGTCCCTCTAGAGCCATTCGATGAGGACTATCTAAACCATCTCGAGCCTCCCGTGAAGCACATGTCCTTCCACGCCTACATCCGGAAGCTGACTGGAGGGGCTGACAAGGGGAAGTTTGTTGCCCTGGAGAACATCAGCTGCAAGATTAAGTCAGGGTGCGAGGGGCACCTCCCGTGGCCGAATGGCATCTGTACTAAGTGCCAGCCGAGCGCCATCACGCTGAACAGACAGAAGTACAGGCATGTGGACAATATCATGTTTGAGAATCACACCGTCGCTGACCGCTTTCTTGACTTCTGGAGAAAGACAGGGAACCAGCATTTTGGGTACTTATACGGACGGTACACGGAGCACAAAGACATTCCCCTTGGCATCAGGGCTGAAGTGGCTGCGATTTATGAGCCACCTCAGATTGGTACACAGAACAGCTTGGAGCTTCTTGAGGATCCAAAAGCTGAAGTGGTCGATGAAATTGCTGCCAAACTTGGCCTGCGGAAGGTTGGCTGGATATTTACAGACCTCGTCTCAGAAGATACCCGAAAGGGTACCGTCCGCTACAGTCGAAATAAGGACACCTATTTCCTAAGTTCAGAAGAGTGCATCACTGCAGGAGACTTCCAGAACAAGCATCCCAACATGTGCCGGCTCTCTCCAGACGGACATTTTGGATCCAAGTTTGTTACTGCAGTGGCTACAGGTGGTCCTGACAACCAAGTCCACTTTGAAGGGTACCAGGTGTCCAATCAGTGTATGGCACTGGTCCGTGATGAGTGTTTGCTGCCATGCAAGGACGCCCCGGAGCTTGGCTACGCCAAGGAGTCTAGCAGTGAGCAGTACGTGCCTGATGTGTTTTATAAGGACGTAGACAAGTTTGGCAACGAGATCACCCAGCTGGCCCGGCCCCTGCCTGTGGAGTATCTCATCATAGACATCACAACAACTTTCCCCAAGGATCCAGTTTACACTTTTTCTATTTCGCAAAATCCATTTCCTATTGAAAACCGGGATGTATTGGGTGAGACACAGGACTTCCATAGCTTGGCCACCTATTTGTCTCAGAATACCTCATCTGTGTTCTTGGATACCATCTCAGATTTCCACCTCTTGCTGTTCCTGGTCACCAATGAAGTTATGCCTCTGCAGGACAGCATCAGCTTGCTGCTGGAGGCCGTGCGGACCAGAAATGAGGAGCTCGCCCAGACATGGAAGAGGTCTGAGCAGTGGGCCACCATCGAGCAGCTGTGCAGCACAGTTGGCGGGCAGCTCCCAGGTCTCCATGAGTACGGCGCCGTCGGGGGCTCCACACACACGGCCACTGCAGCCATGTGGGCCTGTCAGCACTGCACGTTCATGAACCAGCCAGGCACAGGCCACTGCGAGATGTGCAGCCTCCCCAGGACCTAG
Amino sequence
LERRWRRRREAGAGAEAAAGSARPLGRQAAAARGSSPEAGAAAMAESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSLNLLKIKHGDLLFLFPSSLAGPSSEMETSVPPGFKVFGAPNVVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHVDNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQNSLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNMCRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYKDVDKFGNEITQLARPLPVEYLIIDITTTFPKDPVYTFSISQNPFPIENRDVLGETQDFHSLATYLSQNTSSVFLDTISDFHLLLFLVTNEVMPLQDSISLLLEAVRTRNEELAQTWKRSEQWATIEQLCSTVGGQLPGLHEYGAVGGSTHTATAAMWACQHCTFMNQPGTGHCEMCSLPRT*