ENST00000705719.1 NPLOC4

Information
Transcript ID
ENST00000705719.1
Genome
hg19
Position
chr17:79,523,913-79,604,138
Strand
-
CDS length
1,956
Amino acid length
652
Gene symbol
NPLOC4
Gene type
protein-coding
Gene description
NPL4 homolog, ubiquitin recognition factor
Gene Entrez Gene ID
55666
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
17 79,523,913 79,526,442
16 79,532,531 79,532,633
15 79,534,443 79,534,559
14 79,536,042 79,536,137
13 79,539,043 79,539,114
12 79,555,970 79,556,130
11 79,563,142 79,563,268
10 79,564,271 79,564,342
9 79,567,367 79,567,453
8 79,571,574 79,571,753
7 79,573,717 79,573,840
6 79,575,754 79,575,848
5 79,577,236 79,577,284
4 79,580,344 79,580,520
3 79,589,192 79,589,304
2 79,596,751 79,596,831
1 79,603,942 79,604,138
CDS
Exon number Type Start Stop
17 CDS 79,526,285 79,526,442
16 CDS 79,532,531 79,532,633
15 CDS 79,534,443 79,534,559
14 CDS 79,536,042 79,536,137
13 CDS 79,539,043 79,539,114
12 CDS 79,555,970 79,556,130
11 CDS 79,563,142 79,563,268
10 CDS 79,564,271 79,564,342
9 CDS 79,567,367 79,567,453
8 CDS 79,571,574 79,571,753
7 CDS 79,573,717 79,573,840
6 CDS 79,575,754 79,575,848
5 CDS 79,577,236 79,577,284
4 CDS 79,580,344 79,580,520
3 CDS 79,589,192 79,589,304
2 CDS 79,596,751 79,596,831
1 CDS 79,603,942 79,604,085
Other genome
Genome Chromosome Start End Links
hg38 chr17 81,556,887 81,637,112 Link
CDS sequence
CTGGAGCGGCGGTGGCGGCGGCGTAGGGAGGCCGGGGCCGGGGCTGAGGCCGCGGCCGGGTCTGCGAGGCCCTTGGGGCGGCAGGCGGCGGCGGCCCGGGGCTCGAGCCCGGAGGCAGGAGCAGCCGCCATGGCCGAGAGCATCATAATTCGTGTCCAGTCCCCGGATGGAGTGAAGCGGATCACAGCAACAAAGAGAGAAACAGCAGCAACATTTTTGAAAAAGGTTGCAAAGGAGTTTGGCTTCCAAAATAATGGCTTCTCGGTTTACATCAATAGAAACAAGACCGGAGAGATAACAGCCTCCTCCAACAAATCCCTCAACTTGCTAAAAATCAAGCATGGCGATTTGTTGTTCCTGTTTCCCTCGAGCCTTGCTGGGCCCTCATCTGAAATGGAGACGTCAGTTCCACCGGGCTTCAAAGTCTTTGGCGCTCCCAACGTGGTGGAGGATGAGATTGATCAGTACCTCAGCAAACAGGACGGGAAGATTTACAGAAGCCGAGACCCACAGCTATGCCGCCACGGCCCTTTGGGGAAATGCGTGCACTGCGTCCCTCTAGAGCCATTCGATGAGGACTATCTAAACCATCTCGAGCCTCCCGTGAAGCACATGTCCTTCCACGCCTACATCCGGAAGCTGACTGGAGGGGCTGACAAGGGGAAGTTTGTTGCCCTGGAGAACATCAGCTGCAAGATTAAGTCAGGGTGCGAGGGGCACCTCCCGTGGCCGAATGGCATCTGTACTAAGTGCCAGCCGAGCGCCATCACGCTGAACAGACAGAAGTACAGGCATGTGGACAATATCATGTTTGAGAATCACACCGTCGCTGACCGCTTTCTTGACTTCTGGAGAAAGACAGGGAACCAGCATTTTGGGTACTTATACGGACGGTACACGGAGCACAAAGACATTCCCCTTGGCATCAGGGCTGAAGTGGCTGCGATTTATGAGCCACCTCAGATTGGTACACAGAACAGCTTGGAGCTTCTTGAGGATCCAAAAGCTGAAGTGGTCGATGAAATTGCTGCCAAACTTGGCCTGCGGAAGGTTGGCTGGATATTTACAGACCTCGTCTCAGAAGATACCCGAAAGGGTACCGTCCGCTACAGTCGAAATAAGGACACCTATTTCCTAAGTTCAGAAGAGTGCATCACTGCAGGAGACTTCCAGAACAAGCATCCCAACATGTGCCGGCTCTCTCCAGACGGACATTTTGGATCCAAGTTTGTTACTGCAGTGGCTACAGGTGGTCCTGACAACCAAGTCCACTTTGAAGGGTACCAGGTGTCCAATCAGTGTATGGCACTGGTCCGTGATGAGTGTTTGCTGCCATGCAAGGACGCCCCGGAGCTTGGCTACGCCAAGGAGTCTAGCAGTGAGCAGTACGTGCCTGATGTGTTTTATAAGGACGTAGACAAGTTTGGCAACGAGATCACCCAGCTGGCCCGGCCCCTGCCTGTGGAGTATCTCATCATAGACATCACAACAACTTTCCCCAAGGATCCAGTTTACACTTTTTCTATTTCGCAAAATCCATTTCCTATTGAAAACCGGGATGTATTGGGTGAGACACAGGACTTCCATAGCTTGGCCACCTATTTGTCTCAGAATACCTCATCTGTGTTCTTGGATACCATCTCAGATTTCCACCTCTTGCTGTTCCTGGTCACCAATGAAGTTATGCCTCTGCAGGACAGCATCAGCTTGCTGCTGGAGGCCGTGCGGACCAGAAATGAGGAGCTCGCCCAGACATGGAAGAGGTCTGAGCAGTGGGCCACCATCGAGCAGCTGTGCAGCACAGTTGGCGGGCAGCTCCCAGGTCTCCATGAGTACGGCGCCGTCGGGGGCTCCACACACACGGCCACTGCAGCCATGTGGGCCTGTCAGCACTGCACGTTCATGAACCAGCCAGGCACAGGCCACTGCGAGATGTGCAGCCTCCCCAGGACCTAG
Amino sequence
LERRWRRRREAGAGAEAAAGSARPLGRQAAAARGSSPEAGAAAMAESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSNKSLNLLKIKHGDLLFLFPSSLAGPSSEMETSVPPGFKVFGAPNVVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQKYRHVDNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQNSLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNMCRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYKDVDKFGNEITQLARPLPVEYLIIDITTTFPKDPVYTFSISQNPFPIENRDVLGETQDFHSLATYLSQNTSSVFLDTISDFHLLLFLVTNEVMPLQDSISLLLEAVRTRNEELAQTWKRSEQWATIEQLCSTVGGQLPGLHEYGAVGGSTHTATAAMWACQHCTFMNQPGTGHCEMCSLPRT*