ENST00000305513.12 SMYD4
Information
- Transcript ID
- ENST00000305513.12
- Genome
- hg38
- Position
- chr17:1,779,485-1,829,902
- Strand
- -
- CDS length
- 2,415
- Amino acid length
- 805
- Gene symbol
- SMYD4
- Gene type
- protein-coding
- Gene description
- SET and MYND domain containing 4
- Gene Entrez Gene ID
- 114826
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 11 | 1,779,485 | 1,781,439 |
| 10 | 1,783,035 | 1,783,158 |
| 9 | 1,783,360 | 1,783,476 |
| 8 | 1,784,326 | 1,784,461 |
| 7 | 1,786,810 | 1,786,973 |
| 6 | 1,787,422 | 1,787,604 |
| 5 | 1,799,857 | 1,801,024 |
| 4 | 1,804,626 | 1,804,715 |
| 3 | 1,811,971 | 1,812,115 |
| 2 | 1,827,861 | 1,828,006 |
| 1 | 1,829,726 | 1,829,902 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 1,781,286 | 1,781,439 |
| 10 | CDS | 1,783,035 | 1,783,158 |
| 9 | CDS | 1,783,360 | 1,783,476 |
| 8 | CDS | 1,784,326 | 1,784,461 |
| 7 | CDS | 1,786,810 | 1,786,973 |
| 6 | CDS | 1,787,422 | 1,787,604 |
| 5 | CDS | 1,799,857 | 1,801,024 |
| 4 | CDS | 1,804,626 | 1,804,715 |
| 3 | CDS | 1,811,971 | 1,812,115 |
| 2 | CDS | 1,827,861 | 1,827,994 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 1,682,779 | 1,733,196 | Link |
CDS sequence
ATGGATCTGCCTGTGGATGAATGGAAATCATATCTGCTTCAAAAGTGGGCTTCACTCCCGACGTCTGTTCAGGTCACAATTTCTACAGCAGAGACCTTGAGGGATATCTTTCTTCACTCCTCTTCACTTCTTCAACCTGAGGATGAGCTGTTTCTAAAAAGACTTTCTAAAGGTTACTTGGTGGGAAAGGACTCGGACGCTCCTCTTTTCTACAGAGAAGAAGGAAACAAAAAATTTCAGGAGAAAGATTACACAGGAGCTGCAGTGCTGTACTCTAAGGGAGTGTCACATTCAAGGCCTAACACTGAGGACATGTCACTGTGTCATGCTAACCGCTCGGCAGCCCTCTTCCACCTGGGTCAGTATGAGACGTGTCTTAAAGACATTAACAGAGCACAGACACATGGGTATCCAGAAAGGTTGCAACCCAAGATTATGTTACGTAAAGCAGAATGTCTGGTGGCCCTGGGGAGACTGCAGGAGGCAAGCCAGACCATCAGTGATCTTGAAAGGAACTTCACAGCCACACCAGCCCTAGCAGATGTCCTCCCTCAGACTCTGCAGAGAAACCTCCATCGTCTGAAAATGAAGATGCAAGAAAAGGACAGTCTCACAGAAAGCTTCCCAGCAGCTCTGGCCAAAACCCTTGAGGATGCAGCGCTGAGGGAGGAGAATGAACAACTTTCCAATGCCTCATCATCCATCGGCTTATGCGTAGATCCTTTAAAAGGTCGCTGTCTCGTTGCCACAAAAGATATTCTCCCAGGAGAGCTCCTGGTGCAGGAGGATGCTTTTGTGAGTGTTCTCAACCCAGGAGAACTGCCACCACCGCATCACGGCCTAGACAGCAAATGGGACACCAGAGTCACCAATGGGGACCTCTATTGTCACCGATGTTTGAAGCACACTTTGGCCACAGTTCCGTGTGACGGATGCAGTTATGCCAAGTATTGCAGCCAGGAGTGTTTGCAGCAGGCCTGGGAGCTCTACCACAGGACAGAATGTCCTCTGGGAGGGCTGCTTCTCACACTGGGTGTCTTTTGCCACATTGCCCTGAGGTTGACTCTTTTGGTGGGATTTGAGGATGTTCGCAAAATCATAACGAAGCTTTGTGATAAGATTAGTAACAAGGACATCTGTTTACCTGAAAGCAACAATCAGGTCAAGACACTTAATTATGGCCTAGGGGAGAGTGAGAAAAATGGCAACATCGTTGAGACCCCAATTCCTGGATGCGATATTAATGGGAAGTATGAAAATAATTATAATGCTGTCTTCAACCTTTTGCCCCACACTGAAAACCATAGCCCAGAGCACAAATTCCTCTGTGCTCTCTGTGTTTCTGCACTGTGCAGACAGCTAGAAGCAGCCAGTTTACAGGCCATCCCAACTGAGAGGATTGTGAACTCCTCTCAGCTTAAAGCAGCAGTGACACCTGAATTGTGTCCTGACGTGACTATTTGGGGAGTGGCGATGCTGAGACACATGTTACAGCTTCAGTGTAACGCTCAGGCGATGACCACCATACAACACACAGGACCTAAAGGGAGCATCGTTACCGACAGCAGGCAGGTGCGCCTTGCCACAGGCATCTTCCCTGTTATCAGCCTCCTGAACCACTCCTGTAGCCCCAACACCAGCGTGTCCTTCATTAGCACTGTCGCCACCATCCGGGCGTCACAGCGGATTAGAAAGGGGCAAGAGATTCTCCACTGCTATGGGCCTCACAAGAGCCGGATGGGGGTTGCCGAAAGGCAGCAGAAGCTGAGGTCTCAGTATTTCTTTGACTGCGCCTGTCCAGCTTGTCAAACTGAGGCACACAGGATGGCTGCAGGGCCCAGGTGGGAAGCATTCTGTTGCAACAGTTGCGGAGCGCCCATGCAGGGAGATGACGTGCTGCGCTGTGGCAGCAGATCTTGTGCAGAATCCGCCGTCAGCAGGGACCACCTGGTCTCTCGGTTACAGGACCTACAGCAGCAGGTCAGAGTGGCCCAGAAGCTTCTCAGAGATGGTGAACTAGAGCGAGCTGTTCAGCGGCTGTCGGGGTGCCAGCGTGACGCCGAGAGCTTCCTGTGGGCAGAGCACGCCGTGGTGGGAGAGATCGCGGATGGCCTGGCCCGGGCCTGTGCTGCCTTAGGAGACTGGCAAAAGTCAGCCACCCATCTACAGAGGAGTCTCTACGTGGTGGAGGTTCGCCACGGGCCGTCCAGTGTTGAAATGGGCCATGAGCTCTTCAAATTGGCCCAGATCTTTTTCAACGGGTTTGCAGTACCCGAAGCCCTGAGCACAATACAGAAAGCTGAGGAGGTTCTGTCGCTGCACTGTGGCCCATGGGACGATGAAATCCAGGAGCTCCAGAAGATGAAATCCTGTTTGTTGGACTTACCACCCACCCCTGTAGGGCCTGCATTGTAG
Amino sequence
MDLPVDEWKSYLLQKWASLPTSVQVTISTAETLRDIFLHSSSLLQPEDELFLKRLSKGYLVGKDSDAPLFYREEGNKKFQEKDYTGAAVLYSKGVSHSRPNTEDMSLCHANRSAALFHLGQYETCLKDINRAQTHGYPERLQPKIMLRKAECLVALGRLQEASQTISDLERNFTATPALADVLPQTLQRNLHRLKMKMQEKDSLTESFPAALAKTLEDAALREENEQLSNASSSIGLCVDPLKGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHTLATVPCDGCSYAKYCSQECLQQAWELYHRTECPLGGLLLTLGVFCHIALRLTLLVGFEDVRKIITKLCDKISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVFNLLPHTENHSPEHKFLCALCVSALCRQLEAASLQAIPTERIVNSSQLKAAVTPELCPDVTIWGVAMLRHMLQLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCSPNTSVSFISTVATIRASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPACQTEAHRMAAGPRWEAFCCNSCGAPMQGDDVLRCGSRSCAESAVSRDHLVSRLQDLQQQVRVAQKLLRDGELERAVQRLSGCQRDAESFLWAEHAVVGEIADGLARACAALGDWQKSATHLQRSLYVVEVRHGPSSVEMGHELFKLAQIFFNGFAVPEALSTIQKAEEVLSLHCGPWDDEIQELQKMKSCLLDLPPTPVGPAL*