ENST00000305513.12 SMYD4
Information
- Transcript ID
- ENST00000305513.12
- Genome
- hg19
- Position
- chr17:1,682,779-1,733,196
- Strand
- -
- CDS length
- 2,415
- Amino acid length
- 805
- Gene symbol
- SMYD4
- Gene type
- protein-coding
- Gene description
- SET and MYND domain containing 4
- Gene Entrez Gene ID
- 114826
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 11 | 1,682,779 | 1,684,733 |
| 10 | 1,686,329 | 1,686,452 |
| 9 | 1,686,654 | 1,686,770 |
| 8 | 1,687,620 | 1,687,755 |
| 7 | 1,690,104 | 1,690,267 |
| 6 | 1,690,716 | 1,690,898 |
| 5 | 1,703,151 | 1,704,318 |
| 4 | 1,707,920 | 1,708,009 |
| 3 | 1,715,265 | 1,715,409 |
| 2 | 1,731,155 | 1,731,300 |
| 1 | 1,733,020 | 1,733,196 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 1,684,580 | 1,684,733 |
| 10 | CDS | 1,686,329 | 1,686,452 |
| 9 | CDS | 1,686,654 | 1,686,770 |
| 8 | CDS | 1,687,620 | 1,687,755 |
| 7 | CDS | 1,690,104 | 1,690,267 |
| 6 | CDS | 1,690,716 | 1,690,898 |
| 5 | CDS | 1,703,151 | 1,704,318 |
| 4 | CDS | 1,707,920 | 1,708,009 |
| 3 | CDS | 1,715,265 | 1,715,409 |
| 2 | CDS | 1,731,155 | 1,731,288 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 1,779,485 | 1,829,902 | Link |
CDS sequence
ATGGATCTGCCTGTGGATGAATGGAAATCATATCTGCTTCAAAAGTGGGCTTCACTCCCGACGTCTGTTCAGGTCACAATTTCTACAGCAGAGACCTTGAGGGATATCTTTCTTCACTCCTCTTCACTTCTTCAACCTGAGGATGAGCTGTTTCTAAAAAGACTTTCTAAAGGTTACTTGGTGGGAAAGGACTCGGACGCTCCTCTTTTCTACAGAGAAGAAGGAAACAAAAAATTTCAGGAGAAAGATTACACAGGAGCTGCAGTGCTGTACTCTAAGGGAGTGTCACATTCAAGGCCTAACACTGAGGACATGTCACTGTGTCATGCTAACCGCTCGGCAGCCCTCTTCCACCTGGGTCAGTATGAGACGTGTCTTAAAGACATTAACAGAGCACAGACACATGGGTATCCAGAAAGGTTGCAACCCAAGATTATGTTACGTAAAGCAGAATGTCTGGTGGCCCTGGGGAGACTGCAGGAGGCAAGCCAGACCATCAGTGATCTTGAAAGGAACTTCACAGCCACACCAGCCCTAGCAGATGTCCTCCCTCAGACTCTGCAGAGAAACCTCCATCGTCTGAAAATGAAGATGCAAGAAAAGGACAGTCTCACAGAAAGCTTCCCAGCAGCTCTGGCCAAAACCCTTGAGGATGCAGCGCTGAGGGAGGAGAATGAACAACTTTCCAATGCCTCATCATCCATCGGCTTATGCGTAGATCCTTTAAAAGGTCGCTGTCTCGTTGCCACAAAAGATATTCTCCCAGGAGAGCTCCTGGTGCAGGAGGATGCTTTTGTGAGTGTTCTCAACCCAGGAGAACTGCCACCACCGCATCACGGCCTAGACAGCAAATGGGACACCAGAGTCACCAATGGGGACCTCTATTGTCACCGATGTTTGAAGCACACTTTGGCCACAGTTCCGTGTGACGGATGCAGTTATGCCAAGTATTGCAGCCAGGAGTGTTTGCAGCAGGCCTGGGAGCTCTACCACAGGACAGAATGTCCTCTGGGAGGGCTGCTTCTCACACTGGGTGTCTTTTGCCACATTGCCCTGAGGTTGACTCTTTTGGTGGGATTTGAGGATGTTCGCAAAATCATAACGAAGCTTTGTGATAAGATTAGTAACAAGGACATCTGTTTACCTGAAAGCAACAATCAGGTCAAGACACTTAATTATGGCCTAGGGGAGAGTGAGAAAAATGGCAACATCGTTGAGACCCCAATTCCTGGATGCGATATTAATGGGAAGTATGAAAATAATTATAATGCTGTCTTCAACCTTTTGCCCCACACTGAAAACCATAGCCCAGAGCACAAATTCCTCTGTGCTCTCTGTGTTTCTGCACTGTGCAGACAGCTAGAAGCAGCCAGTTTACAGGCCATCCCAACTGAGAGGATTGTGAACTCCTCTCAGCTTAAAGCAGCAGTGACACCTGAATTGTGTCCTGACGTGACTATTTGGGGAGTGGCGATGCTGAGACACATGTTACAGCTTCAGTGTAACGCTCAGGCGATGACCACCATACAACACACAGGACCTAAAGGGAGCATCGTTACCGACAGCAGGCAGGTGCGCCTTGCCACAGGCATCTTCCCTGTTATCAGCCTCCTGAACCACTCCTGTAGCCCCAACACCAGCGTGTCCTTCATTAGCACTGTCGCCACCATCCGGGCGTCACAGCGGATTAGAAAGGGGCAAGAGATTCTCCACTGCTATGGGCCTCACAAGAGCCGGATGGGGGTTGCCGAAAGGCAGCAGAAGCTGAGGTCTCAGTATTTCTTTGACTGCGCCTGTCCAGCTTGTCAAACTGAGGCACACAGGATGGCTGCAGGGCCCAGGTGGGAAGCATTCTGTTGCAACAGTTGCGGAGCGCCCATGCAGGGAGATGACGTGCTGCGCTGTGGCAGCAGATCTTGTGCAGAATCCGCCGTCAGCAGGGACCACCTGGTCTCTCGGTTACAGGACCTACAGCAGCAGGTCAGAGTGGCCCAGAAGCTTCTCAGAGATGGTGAACTAGAGCGAGCTGTTCAGCGGCTGTCGGGGTGCCAGCGTGACGCCGAGAGCTTCCTGTGGGCAGAGCACGCCGTGGTGGGAGAGATCGCGGATGGCCTGGCCCGGGCCTGTGCTGCCTTAGGAGACTGGCAAAAGTCAGCCACCCATCTACAGAGGAGTCTCTACGTGGTGGAGGTTCGCCACGGGCCGTCCAGTGTTGAAATGGGCCATGAGCTCTTCAAATTGGCCCAGATCTTTTTCAACGGGTTTGCAGTACCCGAAGCCCTGAGCACAATACAGAAAGCTGAGGAGGTTCTGTCGCTGCACTGTGGCCCATGGGACGATGAAATCCAGGAGCTCCAGAAGATGAAATCCTGTTTGTTGGACTTACCACCCACCCCTGTAGGGCCTGCATTGTAG
Amino sequence
MDLPVDEWKSYLLQKWASLPTSVQVTISTAETLRDIFLHSSSLLQPEDELFLKRLSKGYLVGKDSDAPLFYREEGNKKFQEKDYTGAAVLYSKGVSHSRPNTEDMSLCHANRSAALFHLGQYETCLKDINRAQTHGYPERLQPKIMLRKAECLVALGRLQEASQTISDLERNFTATPALADVLPQTLQRNLHRLKMKMQEKDSLTESFPAALAKTLEDAALREENEQLSNASSSIGLCVDPLKGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHTLATVPCDGCSYAKYCSQECLQQAWELYHRTECPLGGLLLTLGVFCHIALRLTLLVGFEDVRKIITKLCDKISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVFNLLPHTENHSPEHKFLCALCVSALCRQLEAASLQAIPTERIVNSSQLKAAVTPELCPDVTIWGVAMLRHMLQLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCSPNTSVSFISTVATIRASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPACQTEAHRMAAGPRWEAFCCNSCGAPMQGDDVLRCGSRSCAESAVSRDHLVSRLQDLQQQVRVAQKLLRDGELERAVQRLSGCQRDAESFLWAEHAVVGEIADGLARACAALGDWQKSATHLQRSLYVVEVRHGPSSVEMGHELFKLAQIFFNGFAVPEALSTIQKAEEVLSLHCGPWDDEIQELQKMKSCLLDLPPTPVGPAL*