ENST00000480744.3 LIMS3

Information
Transcript ID
ENST00000480744.3
Genome
hg38
Position
chr2:109,898,688-109,925,625
Strand
+
CDS length
1,197
Amino acid length
399
Gene symbol
LIMS3
Gene type
protein-coding
Gene description
LIM zinc finger domain containing 3
Gene Entrez Gene ID
96626
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 109,898,688 109,898,910
2 109,903,253 109,903,412
3 109,914,411 109,914,477
4 109,915,952 109,916,072
5 109,916,507 109,916,656
6 109,919,493 109,919,643
7 109,920,254 109,920,346
8 109,921,640 109,921,688
9 109,924,348 109,924,423
10 109,924,622 109,925,625
CDS
Exon number Type Start Stop
1 CDS 109,898,729 109,898,910
2 CDS 109,903,253 109,903,412
3 CDS 109,914,411 109,914,477
4 CDS 109,915,952 109,916,072
5 CDS 109,916,507 109,916,656
6 CDS 109,919,493 109,919,643
7 CDS 109,920,254 109,920,346
8 CDS 109,921,640 109,921,688
9 CDS 109,924,348 109,924,423
10 CDS 109,924,622 109,924,769
CDS sequence
ATGGCCTTCTCAGGCCGAGCGCGCCCCTGCATTATCCCAGAGAACGAAGAAATCCCCCGAGCAGCCCTTAACACTGTCCACGAGGCCAATGGGACCGAGGACGAGAGGGCTGTTTCCAAACTGCAGCGCAGGCACAGTGACGTGAAAGTCTACAAGGAGTTCTGTGACTTTTATGCGAAATTCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCGCCCGCTGAGACGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGCGCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTACTGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATCATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGACCTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGTCGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGCCATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCATTTCAACTGCGCCAACTGCGGGAAGGATCTGACTGCCGATGCACAGGAGCTGAAAGGGGAGCTATACTGCCTGCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGCGCTTGCCGACGGCCCATCGAAGGGCGTGTGGTGAACGCCATGGGCAAGCAGTGGCATGTGGAGCATTTTGTTTGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCGTATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTTATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGTTCTACCTGCAACACTAAATTAACACTCAAGGATAAGTTTGTTGAAATTGACCTAAAGCCAGTCTGCAAACACTGTTATGAGAAAATGCCAGAAGAATTTAAGAGGCGACTTGCCAAACGGGAGAGAGAAGCAAAGGATAAGGACAAGCAGAAAAAGAAAAAGCCAGTCTGTTTGTAA
Amino sequence
MAFSGRARPCIIPENEEIPRAALNTVHEANGTEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKDLTADAQELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL*