LIMS3 LIM zinc finger domain containing 3
Information
- Symbol
- LIMS3
- Type
- protein-coding
- Description
- LIM zinc finger domain containing 3
- Entrez Gene ID
- 96626
- Genome
- hg19
- Position
- chr2:110,656,005-110,664,033
- Genome
- hg38
- Position
- chr2:109,898,688-109,925,625
- HGNC
- HGNC:30047 HGNC
- Ensembl
- ENSG00000256977 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
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0 |
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0 |
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0 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | LIMS3L |
| SYNONYM | LIMS4 |
| SYNONYM | PINCH-3 |
| HGNC | HGNC:30047 HGNC |
| Ensembl | ENSG00000256977 Ensembl |
| AllianceGenome | HGNC:30047 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000487150.2 | hg38 | chr2 | 109,901,542 | 109,906,454 | 4,913 |
| ENST00000437679.3 | hg38 | chr2 | 109,898,428 | 109,906,456 | 8,029 |
| ENST00000480744.3 | hg38 | chr2 | 109,898,688 | 109,925,625 | 26,938 |
| ENST00000437679.2 | hg19 | chr2 | 110,656,005 | 110,664,033 | 8,029 |
| ENST00000553749.1 | hg19 | chr2 | 110,656,268 | 110,677,180 | 20,913 |
| ENST00000487150.1 | hg19 | chr2 | 110,659,119 | 110,664,031 | 4,913 |
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