ENST00000593074.5 CLIP3

Information
Transcript ID
ENST00000593074.5
Genome
hg38
Position
chr19:36,016,036-36,032,671
Strand
-
CDS length
1,644
Amino acid length
548
Gene symbol
CLIP3
Gene type
protein-coding
Gene description
CAP-Gly domain containing linker protein 3
Gene Entrez Gene ID
25999
Variants

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Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
13 36,016,036 36,016,212
12 36,016,907 36,016,979
11 36,017,386 36,017,450
10 36,017,655 36,017,778
9 36,017,848 36,017,991
8 36,018,898 36,019,026
7 36,019,171 36,019,306
6 36,024,396 36,024,632
5 36,026,147 36,026,265
4 36,026,586 36,026,747
3 36,026,952 36,027,045
2 36,027,132 36,027,271
1 36,032,192 36,032,671
CDS
Exon number Type Start Stop
13 CDS 36,016,158 36,016,212
12 CDS 36,016,907 36,016,979
11 CDS 36,017,386 36,017,450
10 CDS 36,017,655 36,017,778
9 CDS 36,017,848 36,017,991
8 CDS 36,018,898 36,019,026
7 CDS 36,019,171 36,019,306
6 CDS 36,024,396 36,024,632
5 CDS 36,026,147 36,026,265
4 CDS 36,026,586 36,026,747
3 CDS 36,026,952 36,027,045
2 CDS 36,027,132 36,027,271
1 CDS 36,032,192 36,032,357
Other genome
Genome Chromosome Start End Links
hg19 chr19 36,506,938 36,523,573 Link
CDS sequence
ATGACTAAGACAGATCCTGCCCCGATGGCCCCGCCACCCCGAGGAGAGGAGGAAGAAGAGGAGGAGGAGGATGAACCCGTCCCCGAGGCCCCCAGCCCCACCCAGGAGCGCCGGCAGAAGCCTGTTGTGCACCCCTCGGCACCTGCCCCCCTCCCTAAGGACTACGCTTTCACCTTCTTCGATCCCAATGACCCGGCGTGCCAGGAGATCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCGAGGCTGCCATGTGAACGATCGTGACGGGCTGACCGACATGACACTGCTCCACTATGCGTGCAAAGCTGGGGCCCACGGAGTCGGGGACCCCGCGGCAGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCTGGGCGCAGATGTGACGCTGCGCAGCCGCTGGACCAACATGAACGCGCTTCACTACGCGGCCTATTTTGATGTGCCCGACCTCGTGCGTGTGCTGCTGAAGGGTGCGAGGCCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAAAAGGACAGGTGCCGGCGGAGGTGGTCCCAGATCCTATGGACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGCTTCTGGAAGAGGCAGTGCCACTATCTTGCGCCCTCCCCAAGGTCACGCTACCCAACTATGACAACGTCCCAGGCAATCTCATGCTTAGCGCACTGGGCTTGCGCCTGGGAGACCGCGTGCTGCTGGATGGCCAGAAGACGGGCACACTGCGGTTCTGTGGGACCACGGAGTTTGCCAGCGGCCAGTGGGTGGGCGTGGAGCTGGACGAACCTGAGGGCAAGAACGATGGCAGCGTTGGGGGCGTTCGGTACTTCATCTGCCCTCCCAAGCAGGGTCTCTTTGCCTCCGTGTCCAAGATCTCCAAGGCAGTGGACGCACCCCCCTCCTCTGTCACCTCCACACCCCGGACCCCCCGGATGGACTTCTCCCGTGTCACCGGCAAAGGCCGCAGGGAACACAAAGGCAAGAAGAAGACCCCATCATCCCCATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGGCCAGAAGCAGGGGATCGTGCGCTTCTACGGGAAGACAGACTTTGCCCCAGGTTACTGGTATGGCATTGAGCTGGACCAGCCCACAGGCAAGCATGATGGCTCTGTCTTCGGTGTCCGGTACTTCACTTGCCCCCCGAGGCATGGGGTCTTCGCACCAGCATCCCGTATTCAGAGGATTGGCGGATCCACTGATTCCCCCGGGGACAGCGTTGGAGCCAAAAAAGTGCATCAAGTGACAATGACGCAGCCCAAACGCACCTTCACCACAGTCCGGACCCCAAAGGACATTGCATCAGAGAACTCCATTTCCAGGTTGCTGTTCTGCTGCTGGTTCCCCTGGATGCTGAGGGCGGAGATGCAGTCTTAG
Amino sequence
MTKTDPAPMAPPPRGEEEEEEEEDEPVPEAPSPTQERRQKPVVHPSAPAPLPKDYAFTFFDPNDPACQEILFDPQTTIPELFAIVRQWVPQVQHKIDVIGNEILRRGCHVNDRDGLTDMTLLHYACKAGAHGVGDPAAAVRLSQQLLALGADVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARPRVVNSTCSDFNHGSALHIAASSLCLGAAKCLLEHGANPALRNRKGQVPAEVVPDPMDMSLDKAEAALVAKELRTLLEEAVPLSCALPKVTLPNYDNVPGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFASVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKTPSSPSLGSLQQRDGAKAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRIQRIGGSTDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENSISRLLFCCWFPWMLRAEMQS*