ENST00000593074.5 CLIP3

Information
Transcript ID
ENST00000593074.5
Genome
hg19
Position
chr19:36,506,938-36,523,573
Strand
-
CDS length
1,644
Amino acid length
548
Gene symbol
CLIP3
Gene type
protein-coding
Gene description
CAP-Gly domain containing linker protein 3
Gene Entrez Gene ID
25999
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
13 36,506,938 36,507,114
12 36,507,809 36,507,881
11 36,508,288 36,508,352
10 36,508,557 36,508,680
9 36,508,750 36,508,893
8 36,509,800 36,509,928
7 36,510,073 36,510,208
6 36,515,298 36,515,534
5 36,517,049 36,517,167
4 36,517,488 36,517,649
3 36,517,854 36,517,947
2 36,518,034 36,518,173
1 36,523,094 36,523,573
CDS
Exon number Type Start Stop
13 CDS 36,507,060 36,507,114
12 CDS 36,507,809 36,507,881
11 CDS 36,508,288 36,508,352
10 CDS 36,508,557 36,508,680
9 CDS 36,508,750 36,508,893
8 CDS 36,509,800 36,509,928
7 CDS 36,510,073 36,510,208
6 CDS 36,515,298 36,515,534
5 CDS 36,517,049 36,517,167
4 CDS 36,517,488 36,517,649
3 CDS 36,517,854 36,517,947
2 CDS 36,518,034 36,518,173
1 CDS 36,523,094 36,523,259
Other genome
Genome Chromosome Start End Links
hg38 chr19 36,016,036 36,032,671 Link
CDS sequence
ATGACTAAGACAGATCCTGCCCCGATGGCCCCGCCACCCCGAGGAGAGGAGGAAGAAGAGGAGGAGGAGGATGAACCCGTCCCCGAGGCCCCCAGCCCCACCCAGGAGCGCCGGCAGAAGCCTGTTGTGCACCCCTCGGCACCTGCCCCCCTCCCTAAGGACTACGCTTTCACCTTCTTCGATCCCAATGACCCGGCGTGCCAGGAGATCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCGAGGCTGCCATGTGAACGATCGTGACGGGCTGACCGACATGACACTGCTCCACTATGCGTGCAAAGCTGGGGCCCACGGAGTCGGGGACCCCGCGGCAGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCTGGGCGCAGATGTGACGCTGCGCAGCCGCTGGACCAACATGAACGCGCTTCACTACGCGGCCTATTTTGATGTGCCCGACCTCGTGCGTGTGCTGCTGAAGGGTGCGAGGCCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAAAAGGACAGGTGCCGGCGGAGGTGGTCCCAGATCCTATGGACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGCTTCTGGAAGAGGCAGTGCCACTATCTTGCGCCCTCCCCAAGGTCACGCTACCCAACTATGACAACGTCCCAGGCAATCTCATGCTTAGCGCACTGGGCTTGCGCCTGGGAGACCGCGTGCTGCTGGATGGCCAGAAGACGGGCACACTGCGGTTCTGTGGGACCACGGAGTTTGCCAGCGGCCAGTGGGTGGGCGTGGAGCTGGACGAACCTGAGGGCAAGAACGATGGCAGCGTTGGGGGCGTTCGGTACTTCATCTGCCCTCCCAAGCAGGGTCTCTTTGCCTCCGTGTCCAAGATCTCCAAGGCAGTGGACGCACCCCCCTCCTCTGTCACCTCCACACCCCGGACCCCCCGGATGGACTTCTCCCGTGTCACCGGCAAAGGCCGCAGGGAACACAAAGGCAAGAAGAAGACCCCATCATCCCCATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGGCCAGAAGCAGGGGATCGTGCGCTTCTACGGGAAGACAGACTTTGCCCCAGGTTACTGGTATGGCATTGAGCTGGACCAGCCCACAGGCAAGCATGATGGCTCTGTCTTCGGTGTCCGGTACTTCACTTGCCCCCCGAGGCATGGGGTCTTCGCACCAGCATCCCGTATTCAGAGGATTGGCGGATCCACTGATTCCCCCGGGGACAGCGTTGGAGCCAAAAAAGTGCATCAAGTGACAATGACGCAGCCCAAACGCACCTTCACCACAGTCCGGACCCCAAAGGACATTGCATCAGAGAACTCCATTTCCAGGTTGCTGTTCTGCTGCTGGTTCCCCTGGATGCTGAGGGCGGAGATGCAGTCTTAG
Amino sequence
MTKTDPAPMAPPPRGEEEEEEEEDEPVPEAPSPTQERRQKPVVHPSAPAPLPKDYAFTFFDPNDPACQEILFDPQTTIPELFAIVRQWVPQVQHKIDVIGNEILRRGCHVNDRDGLTDMTLLHYACKAGAHGVGDPAAAVRLSQQLLALGADVTLRSRWTNMNALHYAAYFDVPDLVRVLLKGARPRVVNSTCSDFNHGSALHIAASSLCLGAAKCLLEHGANPALRNRKGQVPAEVVPDPMDMSLDKAEAALVAKELRTLLEEAVPLSCALPKVTLPNYDNVPGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFASVSKISKAVDAPPSSVTSTPRTPRMDFSRVTGKGRREHKGKKKTPSSPSLGSLQQRDGAKAEVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRIQRIGGSTDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENSISRLLFCCWFPWMLRAEMQS*