ENST00000308824.11 PCMTD2
Information
- Transcript ID
- ENST00000308824.11
- Genome
- hg38
- Position
- chr20:64,255,748-64,276,226
- Strand
- +
- CDS length
- 1,086
- Amino acid length
- 362
- Gene symbol
- PCMTD2
- Gene type
- protein-coding
- Gene description
- protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
- Gene Entrez Gene ID
- 55251
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 64,255,748 | 64,255,870 |
| 2 | 64,259,942 | 64,260,272 |
| 3 | 64,264,429 | 64,264,531 |
| 4 | 64,265,258 | 64,265,429 |
| 5 | 64,267,887 | 64,268,010 |
| 6 | 64,273,221 | 64,276,226 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 64,259,966 | 64,260,272 |
| 3 | CDS | 64,264,429 | 64,264,531 |
| 4 | CDS | 64,265,258 | 64,265,429 |
| 5 | CDS | 64,267,887 | 64,268,010 |
| 6 | CDS | 64,273,221 | 64,273,600 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr20 | 62,887,101 | 62,907,579 | Link |
CDS sequence
ATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCAGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGCGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGTTGACTAAGATAACACGCACAGGTCCTTCAGCTTGGGAAACCAAAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAAAAGATTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCGGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAA
Amino sequence
MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGNIHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEYAKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNLLKVGGILVMPLEEKLTKITRTGPSAWETKKILAVSFAPLIQPCHSESGKSRLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYREK*