ENST00000308824.11 PCMTD2
Information
- Transcript ID
- ENST00000308824.11
- Genome
- hg19
- Position
- chr20:62,887,101-62,907,579
- Strand
- +
- CDS length
- 1,086
- Amino acid length
- 362
- Gene symbol
- PCMTD2
- Gene type
- protein-coding
- Gene description
- protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
- Gene Entrez Gene ID
- 55251
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 62,887,101 | 62,887,223 |
| 2 | 62,891,295 | 62,891,625 |
| 3 | 62,895,782 | 62,895,884 |
| 4 | 62,896,611 | 62,896,782 |
| 5 | 62,899,240 | 62,899,363 |
| 6 | 62,904,574 | 62,907,579 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 62,891,319 | 62,891,625 |
| 3 | CDS | 62,895,782 | 62,895,884 |
| 4 | CDS | 62,896,611 | 62,896,782 |
| 5 | CDS | 62,899,240 | 62,899,363 |
| 6 | CDS | 62,904,574 | 62,904,953 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 64,255,748 | 64,276,226 | Link |
CDS sequence
ATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCAGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGCGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGTTGACTAAGATAACACGCACAGGTCCTTCAGCTTGGGAAACCAAAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAAAAGATTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCGGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAA
Amino sequence
MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGNIHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEYAKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNLLKVGGILVMPLEEKLTKITRTGPSAWETKKILAVSFAPLIQPCHSESGKSRLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYREK*