ENST00000589871.1 RBM42

Information
Transcript ID
ENST00000589871.1
Genome
hg38
Position
chr19:35,629,131-35,637,641
Strand
+
CDS length
1,377
Amino acid length
459
Gene symbol
RBM42
Gene type
protein-coding
Gene description
RNA binding motif protein 42
Gene Entrez Gene ID
79171
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 35,629,131 35,629,281
2 35,629,520 35,629,673
3 35,631,140 35,631,224
4 35,631,331 35,631,405
5 35,633,077 35,633,252
6 35,633,687 35,634,019
7 35,634,256 35,634,373
8 35,637,158 35,637,352
9 35,637,442 35,637,641
CDS
Exon number Type Start Stop
1 CDS 35,629,154 35,629,281
2 CDS 35,629,520 35,629,673
3 CDS 35,631,140 35,631,224
4 CDS 35,631,331 35,631,405
5 CDS 35,633,077 35,633,252
6 CDS 35,633,687 35,634,019
7 CDS 35,634,256 35,634,373
8 CDS 35,637,158 35,637,352
9 CDS 35,637,442 35,637,554
Other genome
Genome Chromosome Start End Links
hg19 chr19 36,120,033 36,128,543 Link
CDS sequence
ATGGCTGGGGCGGGGCCAGCCCCGGGACTCCCGGGTGCAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCCTGTTTGAGCAGGAAGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTGCCTGCGGTGCCCACTGTCCCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGCGACCAACACATACCAGCAGGTCCAGCAGACTCTGGAGGCCCGAGCAGCTGCTGCAGCCACAGTAGTTCCTCCCATGGTGGGTGGCCCTCCTTTTGTAGGCCCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGATTCCGCTCTCTCCTCTGCAGCAGCCGGCCCCCGCCCTATGGCCCTACGGCCCCCTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCTGGACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGGCCCCCGCTGGGCTCCATGGCTGCACTGAGGCCCCCTCTGGAAGAGCCAGCAGCACCCCGAGAGCTGGGCCTAGGCCTGGGGTTGGGCCTGAAAGAGAAGGAAGAGGCAGTGGTGGCGGCGGCGGCTGGGCTGGAGGAGGCTAGCGCGGCTGTGGCCGTGGGGGCAGGAGGTGCCCCAGCTGGCCCTGCAGTCATTGGGCCCAGCCTGCCGCTGGCCCTGGCCATGCCATTGCCCGAGCCTGAGCCCCTGCCCCTCCCGTTGGAGGTCGTCCGCGGCCTCCTGCCCCCGCTGCGCATTCCTGAACTCCTGTCCCTGCGTCCTCGGCCCCGGCCCCCTCGGCCAGAGCCACCCCCAGGCCTCATGGCTCTTGAGGTCCCAGAGCCCCTGGGTGAAGACAAGAAGAAGGGGAAGCCAGAGAAATTGAAACGGTGCATTCGCACAGCGGCAGGGAGCAGCTGGGAGGACCCCAGCCTGCTGGAGTGGGATGCAGATGACTTCCGGATCTTCTGTGGGGATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGACAAGCGCACAGGCAAGACCAAGGGCTACGGCTTCGTCAGCTTCAAGGACCCCAGCGACTACGTGCGCGCCATGCGTGAGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCAGAAGGAAAAGAAGAAGCTGGGCCTGAGATAG
Amino sequence
MAGAGPAPGLPGAGGPVVPGPGAGIPGKSGEERLKEMEAEMALFEQEVLGAPVPGIPTAVPAVPTVPTVPTVEAMQVPAAPVIRPIIATNTYQQVQQTLEARAAAAATVVPPMVGGPPFVGPVGFGPGDRSHLDSPEAREAMFLRRADSALSSAAAGPRPMALRPPHQALVGPPLPGPPGPPMMLPPMARAPGPPLGSMAALRPPLEEPAAPRELGLGLGLGLKEKEEAVVAAAAGLEEASAAVAVGAGGAPAGPAVIGPSLPLALAMPLPEPEPLPLPLEVVRGLLPPLRIPELLSLRPRPRPPRPEPPPGLMALEVPEPLGEDKKKGKPEKLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEKKKLGLR*