ENST00000589871.1 RBM42

Information
Transcript ID
ENST00000589871.1
Genome
hg19
Position
chr19:36,120,033-36,128,543
Strand
+
CDS length
1,377
Amino acid length
459
Gene symbol
RBM42
Gene type
protein-coding
Gene description
RNA binding motif protein 42
Gene Entrez Gene ID
79171
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 36,120,033 36,120,183
2 36,120,422 36,120,575
3 36,122,042 36,122,126
4 36,122,233 36,122,307
5 36,123,979 36,124,154
6 36,124,589 36,124,921
7 36,125,158 36,125,275
8 36,128,060 36,128,254
9 36,128,344 36,128,543
CDS
Exon number Type Start Stop
1 CDS 36,120,056 36,120,183
2 CDS 36,120,422 36,120,575
3 CDS 36,122,042 36,122,126
4 CDS 36,122,233 36,122,307
5 CDS 36,123,979 36,124,154
6 CDS 36,124,589 36,124,921
7 CDS 36,125,158 36,125,275
8 CDS 36,128,060 36,128,254
9 CDS 36,128,344 36,128,456
Other genome
Genome Chromosome Start End Links
hg38 chr19 35,629,131 35,637,641 Link
CDS sequence
ATGGCTGGGGCGGGGCCAGCCCCGGGACTCCCGGGTGCAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCCTGTTTGAGCAGGAAGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTGCCTGCGGTGCCCACTGTCCCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGCGACCAACACATACCAGCAGGTCCAGCAGACTCTGGAGGCCCGAGCAGCTGCTGCAGCCACAGTAGTTCCTCCCATGGTGGGTGGCCCTCCTTTTGTAGGCCCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGATTCCGCTCTCTCCTCTGCAGCAGCCGGCCCCCGCCCTATGGCCCTACGGCCCCCTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCTGGACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGGCCCCCGCTGGGCTCCATGGCTGCACTGAGGCCCCCTCTGGAAGAGCCAGCAGCACCCCGAGAGCTGGGCCTAGGCCTGGGGTTGGGCCTGAAAGAGAAGGAAGAGGCAGTGGTGGCGGCGGCGGCTGGGCTGGAGGAGGCTAGCGCGGCTGTGGCCGTGGGGGCAGGAGGTGCCCCAGCTGGCCCTGCAGTCATTGGGCCCAGCCTGCCGCTGGCCCTGGCCATGCCATTGCCCGAGCCTGAGCCCCTGCCCCTCCCGTTGGAGGTCGTCCGCGGCCTCCTGCCCCCGCTGCGCATTCCTGAACTCCTGTCCCTGCGTCCTCGGCCCCGGCCCCCTCGGCCAGAGCCACCCCCAGGCCTCATGGCTCTTGAGGTCCCAGAGCCCCTGGGTGAAGACAAGAAGAAGGGGAAGCCAGAGAAATTGAAACGGTGCATTCGCACAGCGGCAGGGAGCAGCTGGGAGGACCCCAGCCTGCTGGAGTGGGATGCAGATGACTTCCGGATCTTCTGTGGGGATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGACAAGCGCACAGGCAAGACCAAGGGCTACGGCTTCGTCAGCTTCAAGGACCCCAGCGACTACGTGCGCGCCATGCGTGAGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCAGAAGGAAAAGAAGAAGCTGGGCCTGAGATAG
Amino sequence
MAGAGPAPGLPGAGGPVVPGPGAGIPGKSGEERLKEMEAEMALFEQEVLGAPVPGIPTAVPAVPTVPTVPTVEAMQVPAAPVIRPIIATNTYQQVQQTLEARAAAAATVVPPMVGGPPFVGPVGFGPGDRSHLDSPEAREAMFLRRADSALSSAAAGPRPMALRPPHQALVGPPLPGPPGPPMMLPPMARAPGPPLGSMAALRPPLEEPAAPRELGLGLGLGLKEKEEAVVAAAAGLEEASAAVAVGAGGAPAGPAVIGPSLPLALAMPLPEPEPLPLPLEVVRGLLPPLRIPELLSLRPRPRPPRPEPPPGLMALEVPEPLGEDKKKGKPEKLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEKKKLGLR*