ENST00000396263.6 CCHCR1

Information
Transcript ID
ENST00000396263.6
Genome
hg38
Position
chr6:31,142,444-31,158,201
Strand
-
CDS length
2,190
Amino acid length
730
Gene symbol
CCHCR1
Gene type
protein-coding
Gene description
coiled-coil alpha-helical rod protein 1
Gene Entrez Gene ID
54535
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
16 31,142,444 31,142,716
15 31,142,963 31,143,134
14 31,143,262 31,143,413
13 31,144,687 31,144,788
12 31,144,885 31,145,073
11 31,145,166 31,145,302
10 31,148,405 31,148,511
9 31,148,618 31,148,728
8 31,150,066 31,150,215
7 31,150,455 31,150,565
6 31,150,725 31,150,860
5 31,150,959 31,151,122
4 31,154,496 31,154,799
3 31,156,731 31,156,944
2 31,157,023 31,157,155
1 31,158,167 31,158,201
CDS
Exon number Type Start Stop
16 CDS 31,142,592 31,142,716
15 CDS 31,142,963 31,143,134
14 CDS 31,143,262 31,143,413
13 CDS 31,144,687 31,144,788
12 CDS 31,144,885 31,145,073
11 CDS 31,145,166 31,145,302
10 CDS 31,148,405 31,148,511
9 CDS 31,148,618 31,148,728
8 CDS 31,150,066 31,150,215
7 CDS 31,150,455 31,150,565
6 CDS 31,150,725 31,150,860
5 CDS 31,150,959 31,151,122
4 CDS 31,154,496 31,154,799
3 CDS 31,156,731 31,156,944
2 CDS 31,157,023 31,157,038
Other genome
Genome Chromosome Start End Links
hg19 chr6 31,110,221 31,125,978 Link
CDS sequence
ATGTTTCCACCTTCAGGTTCCACTGGGCTGATTCCCCCCTCCCACTTTCAAGCTCGGCCCCTTTCAACTCTGCCAAGAATGGCTCCCACCTGGCTCTCAGACATTCCCCTGGTCCAACCCCCAGGCCATCAAGATGTCTCAGAGAGGCGGCTAGACACCCAGAGACCTCAAGTGACCATGTGGGAACGGGATGTTTCCAGTGACAGGCAGGAGCCAGGGCGGAGAGGCAGGTCCTGGGGGCTGGAGGGGTCACAGGCCCTGAGCCAGCAGGCTGAGGTGATCGTTCGGCAGCTGCAAGAGCTGCGGCGGCTGGAGGAGGAGGTCCGGCTCCTGCGGGAGACCTCGCTGCAGCAGAAGATGAGGCTAGAGGCCCAGGCCATGGAGCTAGAGGCTCTGGCACGGGCGGAGAAGGCCGGCCGAGCTGAGGCTGAGGGCCTGCGTGCTGCTTTGGCTGGGGCTGAGGTTGTCCGGAAGAACTTGGAAGAGGGGAGCCAGCGGGAGCTGGAAGAGGTTCAGAGGCTGCACCAAGAGCAGCTGTCCTCTTTGACACAGGCTCACGAGGAGGCTCTTTCCAGTTTGACCAGCAAGGCTGAGGGCTTGGAGAAGTCTCTGAGTAGTCTGGAAACCAGAAGAGCAGGGGAAGCCAAGGAGCTGGCCGAGGCTCAGAGGGAGGCCGAGCTGCTTCGGAAGCAGCTGAGCAAGACCCAGGAAGACTTGGAGGCTCAGGTGACCCTGGTTGAGAATCTAAGAAAATATGTTGGGGAACAAGTGCCTTCTGAGGTCCACAGCCAGACATGGGAACTGGAGCGACAGAAGCTTCTGGAAACCATGCAGCACTTGCAGGAGGACCGGGACAGCCTGCATGCCACCGCGGAGCTGCTGCAGGTGCGGGTGCAGAGCCTCACACACATCCTCGCCCTGCAGGAGGAGGAGCTGACCAGGAAGGTTCAACCTTCAGATTCCCTGGAGCCTGAGTTTACCAGGAAGTGCCAGTCCCTGCTGAACCGCTGGCGGGAGAAGGTGTTTGCCCTCATGGTGCAGCTAAAGGCCCAGGAGCTGGAACACAGTGACTCTGTTAAGCAGCTGAAGGGACAGGTGGCCTCACTCCAGGAAAAAGTGACATCCCAGAGCCAGGAGCAGGCCATCCTGCAGCGATCCCTGCAGGACAAAGCCGCAGAGGTGGAGGTGGAGCGTATGGGTGCCAAGGGCCTGCAGTTGGAGCTGAGCCGTGCTCAGGAGGCCAGGCGTCGGTGGCAGCAGCAGACAGCCTCAGCCGAGGAGCAGCTGAGGCTTGTGGTCAATGCTGTCAGCAGCTGTCCCCTACCACCACCGGTCACAGACGTGAGCCTTGAGTTGCAGCAGTTGCGGGAAGAACGGAACCGCCTGGATGCAGAACTGCAGCTGAGTGCCCGCCTCATCCAGCAGGAGGTGGGCCGGGCTCGGGAGCAAGGGGAGGCAGAGCGGCAGCAGCTGAGCAAGGTGGCCCAGCAGCTGGAGCAGGAGCTGCAGCAGACCCAGGAGTCCCTGGCTAGCTTGGGGCTGCAGCTGGAGGTAGCACGCCAGGGCCAGCAGGAGAGCACAGAGGAGGCTGCCAGTCTGCGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGCCCTGCAAGAAAAGGTGGCTGAAGTGGAAACTCGGCTGCGGGAGCAACTCTCAGACACAGAGAGGAGGCTGAACGAGGCTCGGAGGGAGCATGCCAAGGCCGTGGTCTCCTTACGCCAGATTCAGCGCAGAGCCGCCCAGGAAAAGGAGCGGAGCCAGGAACTCAGGCGTCTGCAGGAGGAGGCCCGGAAGGAGGAGGGGCAGCGACTGGCCCGGCGCTTGCAGGAGCTAGAGAGGGATAAGAACCTCATGCTGGCCACCTTGCAGCAGGAAGGTCTCCTCTCCCGTTACAAGCAGCAGCGACTGTTGACAGTTCTTCCTTCCCTACTGGATAAGAAGAAATCTGTGGTGTCCAGCCCCAGGCCTCCAGAGTGTTCAGCATCTGCACCTGTAGCAGCAGCAGTGCCCACCAGGGAGTCCATAAAAGGGTCCCTCTCTGTCCTGCTCGATGACCTGCAGGACCTGAGTGAAGCCATTTCCAAAGAGGAAGCTGTTTGTCAAGGAGACAACCTTGACAGATGCTCCAGCTCCAATCCCCAGATGAGCAGCTAA
Amino sequence
MFPPSGSTGLIPPSHFQARPLSTLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPGRRGRSWGLEGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVVSSPRPPECSASAPVAAAVPTRESIKGSLSVLLDDLQDLSEAISKEEAVCQGDNLDRCSSSNPQMSS*