ENST00000396263.6 CCHCR1

Information
Transcript ID
ENST00000396263.6
Genome
hg19
Position
chr6:31,110,221-31,125,978
Strand
-
CDS length
2,190
Amino acid length
730
Gene symbol
CCHCR1
Gene type
protein-coding
Gene description
coiled-coil alpha-helical rod protein 1
Gene Entrez Gene ID
54535
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
16 31,110,221 31,110,493
15 31,110,740 31,110,911
14 31,111,039 31,111,190
13 31,112,464 31,112,565
12 31,112,662 31,112,850
11 31,112,943 31,113,079
10 31,116,182 31,116,288
9 31,116,395 31,116,505
8 31,117,843 31,117,992
7 31,118,232 31,118,342
6 31,118,502 31,118,637
5 31,118,736 31,118,899
4 31,122,273 31,122,576
3 31,124,508 31,124,721
2 31,124,800 31,124,932
1 31,125,944 31,125,978
CDS
Exon number Type Start Stop
16 CDS 31,110,369 31,110,493
15 CDS 31,110,740 31,110,911
14 CDS 31,111,039 31,111,190
13 CDS 31,112,464 31,112,565
12 CDS 31,112,662 31,112,850
11 CDS 31,112,943 31,113,079
10 CDS 31,116,182 31,116,288
9 CDS 31,116,395 31,116,505
8 CDS 31,117,843 31,117,992
7 CDS 31,118,232 31,118,342
6 CDS 31,118,502 31,118,637
5 CDS 31,118,736 31,118,899
4 CDS 31,122,273 31,122,576
3 CDS 31,124,508 31,124,721
2 CDS 31,124,800 31,124,815
Other genome
Genome Chromosome Start End Links
hg38 chr6 31,142,444 31,158,201 Link
CDS sequence
ATGTTTCCACCTTCAGGTTCCACTGGGCTGATTCCCCCCTCCCACTTTCAAGCTCGGCCCCTTTCAACTCTGCCAAGAATGGCTCCCACCTGGCTCTCAGACATTCCCCTGGTCCAACCCCCAGGCCATCAAGATGTCTCAGAGAGGCGGCTAGACACCCAGAGACCTCAAGTGACCATGTGGGAACGGGATGTTTCCAGTGACAGGCAGGAGCCAGGGCGGAGAGGCAGGTCCTGGGGGCTGGAGGGGTCACAGGCCCTGAGCCAGCAGGCTGAGGTGATCGTTCGGCAGCTGCAAGAGCTGCGGCGGCTGGAGGAGGAGGTCCGGCTCCTGCGGGAGACCTCGCTGCAGCAGAAGATGAGGCTAGAGGCCCAGGCCATGGAGCTAGAGGCTCTGGCACGGGCGGAGAAGGCCGGCCGAGCTGAGGCTGAGGGCCTGCGTGCTGCTTTGGCTGGGGCTGAGGTTGTCCGGAAGAACTTGGAAGAGGGGAGCCAGCGGGAGCTGGAAGAGGTTCAGAGGCTGCACCAAGAGCAGCTGTCCTCTTTGACACAGGCTCACGAGGAGGCTCTTTCCAGTTTGACCAGCAAGGCTGAGGGCTTGGAGAAGTCTCTGAGTAGTCTGGAAACCAGAAGAGCAGGGGAAGCCAAGGAGCTGGCCGAGGCTCAGAGGGAGGCCGAGCTGCTTCGGAAGCAGCTGAGCAAGACCCAGGAAGACTTGGAGGCTCAGGTGACCCTGGTTGAGAATCTAAGAAAATATGTTGGGGAACAAGTGCCTTCTGAGGTCCACAGCCAGACATGGGAACTGGAGCGACAGAAGCTTCTGGAAACCATGCAGCACTTGCAGGAGGACCGGGACAGCCTGCATGCCACCGCGGAGCTGCTGCAGGTGCGGGTGCAGAGCCTCACACACATCCTCGCCCTGCAGGAGGAGGAGCTGACCAGGAAGGTTCAACCTTCAGATTCCCTGGAGCCTGAGTTTACCAGGAAGTGCCAGTCCCTGCTGAACCGCTGGCGGGAGAAGGTGTTTGCCCTCATGGTGCAGCTAAAGGCCCAGGAGCTGGAACACAGTGACTCTGTTAAGCAGCTGAAGGGACAGGTGGCCTCACTCCAGGAAAAAGTGACATCCCAGAGCCAGGAGCAGGCCATCCTGCAGCGATCCCTGCAGGACAAAGCCGCAGAGGTGGAGGTGGAGCGTATGGGTGCCAAGGGCCTGCAGTTGGAGCTGAGCCGTGCTCAGGAGGCCAGGCGTCGGTGGCAGCAGCAGACAGCCTCAGCCGAGGAGCAGCTGAGGCTTGTGGTCAATGCTGTCAGCAGCTGTCCCCTACCACCACCGGTCACAGACGTGAGCCTTGAGTTGCAGCAGTTGCGGGAAGAACGGAACCGCCTGGATGCAGAACTGCAGCTGAGTGCCCGCCTCATCCAGCAGGAGGTGGGCCGGGCTCGGGAGCAAGGGGAGGCAGAGCGGCAGCAGCTGAGCAAGGTGGCCCAGCAGCTGGAGCAGGAGCTGCAGCAGACCCAGGAGTCCCTGGCTAGCTTGGGGCTGCAGCTGGAGGTAGCACGCCAGGGCCAGCAGGAGAGCACAGAGGAGGCTGCCAGTCTGCGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGCCCTGCAAGAAAAGGTGGCTGAAGTGGAAACTCGGCTGCGGGAGCAACTCTCAGACACAGAGAGGAGGCTGAACGAGGCTCGGAGGGAGCATGCCAAGGCCGTGGTCTCCTTACGCCAGATTCAGCGCAGAGCCGCCCAGGAAAAGGAGCGGAGCCAGGAACTCAGGCGTCTGCAGGAGGAGGCCCGGAAGGAGGAGGGGCAGCGACTGGCCCGGCGCTTGCAGGAGCTAGAGAGGGATAAGAACCTCATGCTGGCCACCTTGCAGCAGGAAGGTCTCCTCTCCCGTTACAAGCAGCAGCGACTGTTGACAGTTCTTCCTTCCCTACTGGATAAGAAGAAATCTGTGGTGTCCAGCCCCAGGCCTCCAGAGTGTTCAGCATCTGCACCTGTAGCAGCAGCAGTGCCCACCAGGGAGTCCATAAAAGGGTCCCTCTCTGTCCTGCTCGATGACCTGCAGGACCTGAGTGAAGCCATTTCCAAAGAGGAAGCTGTTTGTCAAGGAGACAACCTTGACAGATGCTCCAGCTCCAATCCCCAGATGAGCAGCTAA
Amino sequence
MFPPSGSTGLIPPSHFQARPLSTLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPGRRGRSWGLEGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSSCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVVSSPRPPECSASAPVAAAVPTRESIKGSLSVLLDDLQDLSEAISKEEAVCQGDNLDRCSSSNPQMSS*