ENST00000531166.5 CASP1

Information
Transcript ID
ENST00000531166.5
Genome
hg38
Position
chr11:105,026,225-105,035,113
Strand
-
CDS length
267
Amino acid length
89
Gene symbol
CASP1
Gene type
protein-coding
Gene description
caspase 1
Gene Entrez Gene ID
834
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 105,026,225 105,026,356
3 105,026,842 105,026,951
2 105,034,424 105,034,474
1 105,035,107 105,035,113
CDS
Exon number Type Start Stop
4 CDS 105,026,258 105,026,356
3 CDS 105,026,842 105,026,951
2 CDS 105,034,424 105,034,474
1 CDS 105,035,107 105,035,113
Other genome
Genome Chromosome Start End Links
hg19 chr11 104,896,952 104,905,840 Link
CDS sequence
ATGGCCGACAAGGTCCTGAAGGAGAAGAGAAAGCTGTTTATCCGTTCCATGGGTGAAGATAATGTTTCTTGGAGACATCCCACAATGGGCTCTGTTTTTATTGGAAGACTCATTGAACATATGCAAGAATATGCCTGTTCCTGTGATGTGGAGGAAATTTTCCGCAAGGTTCGATTTTCATTTGAGCAGCCAGATGGTAGAGCGCAGATGCCCACCACTGAAAGAGTGACTTTGACAAGATGTTTCTACCTCTTCCCAGGACATTAA
Amino sequence
MADKVLKEKRKLFIRSMGEDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTERVTLTRCFYLFPGH*