ENST00000531166.5 CASP1

Information
Transcript ID
ENST00000531166.5
Genome
hg19
Position
chr11:104,896,952-104,905,840
Strand
-
CDS length
267
Amino acid length
89
Gene symbol
CASP1
Gene type
protein-coding
Gene description
caspase 1
Gene Entrez Gene ID
834
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 104,896,952 104,897,083
3 104,897,569 104,897,678
2 104,905,151 104,905,201
1 104,905,834 104,905,840
CDS
Exon number Type Start Stop
4 CDS 104,896,985 104,897,083
3 CDS 104,897,569 104,897,678
2 CDS 104,905,151 104,905,201
1 CDS 104,905,834 104,905,840
Other genome
Genome Chromosome Start End Links
hg38 chr11 105,026,225 105,035,113 Link
CDS sequence
ATGGCCGACAAGGTCCTGAAGGAGAAGAGAAAGCTGTTTATCCGTTCCATGGGTGAAGATAATGTTTCTTGGAGACATCCCACAATGGGCTCTGTTTTTATTGGAAGACTCATTGAACATATGCAAGAATATGCCTGTTCCTGTGATGTGGAGGAAATTTTCCGCAAGGTTCGATTTTCATTTGAGCAGCCAGATGGTAGAGCGCAGATGCCCACCACTGAAAGAGTGACTTTGACAAGATGTTTCTACCTCTTCCCAGGACATTAA
Amino sequence
MADKVLKEKRKLFIRSMGEDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTERVTLTRCFYLFPGH*