ENST00000550553.5 C12orf50
Information
- Transcript ID
- ENST00000550553.5
- Genome
- hg38
- Position
- chr12:87,980,122-88,029,419
- Strand
- -
- CDS length
- 1,128
- Amino acid length
- 376
- Gene symbol
- C12orf50
- Gene type
- protein-coding
- Gene description
- chromosome 12 open reading frame 50
- Gene Entrez Gene ID
- 160419
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
12 | 87,980,122 | 87,980,356 |
11 | 87,983,103 | 87,983,195 |
10 | 87,985,850 | 87,986,053 |
9 | 87,986,312 | 87,986,416 |
8 | 87,989,264 | 87,989,371 |
7 | 87,994,633 | 87,994,743 |
6 | 87,996,374 | 87,996,487 |
5 | 87,996,569 | 87,996,646 |
4 | 87,998,035 | 87,998,190 |
3 | 88,026,488 | 88,026,608 |
2 | 88,026,951 | 88,027,070 |
1 | 88,029,340 | 88,029,419 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
12 | CDS | 87,980,331 | 87,980,356 |
11 | CDS | 87,983,103 | 87,983,195 |
10 | CDS | 87,985,850 | 87,986,053 |
9 | CDS | 87,986,312 | 87,986,416 |
8 | CDS | 87,989,264 | 87,989,371 |
7 | CDS | 87,994,633 | 87,994,743 |
6 | CDS | 87,996,374 | 87,996,487 |
5 | CDS | 87,996,569 | 87,996,646 |
4 | CDS | 87,998,035 | 87,998,190 |
3 | CDS | 88,026,488 | 88,026,608 |
2 | CDS | 88,026,951 | 88,026,962 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr12 | 88,373,899 | 88,423,196 | Link |
CDS sequence
ATGGAAATGCAGCAAAACTGCAGCATTTCATGCTTCTGGGAAACTCAGCCTCTTGGTTGTGTGAAGATCAGCTGTATCTTTTATCACAGCAAACCTCGAAATATCAATGGATTATTTTTGCCACCAAGTAGCAATATCACACTACAGAAAGAAATTCAGGAAGGAATTCCACTCCAGTCCCAGAGTCAAGAACCTCTGAAACCTCAGGAAAATATATCACGACCCATCCACCATCCTTTAGTTTTAAAAACTAATTTTGAGGAAGAAGAGGAAGTAGATGAACAAAATGATGCTTCTAGTTTATGGACAAAGACCCCTGAAGAAATTGAAGAAAAAAGAGCAATAAAGGAGATGTGTTATAAATCTGGGGAATACTACAGATTTCATACTCCTCCAGATATTTTGTCATCAAAAAGCATGACACCTACAGCAGAAAAACAGTTAGAAAAGCCTTTGGAAAATGGCAGTGAATTGCAAGAAGGAGATAGTCTTACAGTTCCGACAAAACTTAGCCAATATGAAAGGCAAGGTGAAATAAAAACATCATTGCATGGGAAACCAAAGACTGACATTGCTGCTTTTGAAAATGGAGGAGGTGACTGTTATGTTCCACAGAGGGTCATATTTCTTGGAGTCGATGAAAGTGAAGCTTTAACTGAAGAGAAAGAAATCACCATATCAAAATGTTCAAATACTAAAGTGAATGATGTCCAGCCAGTGAAGAAGCCTCATTTTAAAGGTGTGAAGAAAAGAAAATGGATTTATGATGAACCACAGAACTTTCCTAACTCTGGAATGCAGAGAGCAGTACAGGCCCCAAGACCCCAAAATAAAATGAGTTATCACCGCAATAATAAAAATCGAAATGCGGAGAATGCATCCTATATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGGCCCACGCATGGGTCCTACAATAAAGTCCATGCTAACAGGGAACCCAAACCCAACCTCAGTCCAGACAAATATACGTCAACATCATATAATGATTCAGCCTGGCGAAAACGAATTCCTTTTTCAAAAACATATTCAAAAAGTGAAAAGATATATCCAGAGCCAAGAAGAAATGGGAGCAAGTAA
Amino sequence
MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNITLQKEIQEGIPLQSQSQEPLKPQENISRPIHHPLVLKTNFEEEEEVDEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHTPPDILSSKSMTPTAEKQLEKPLENGSELQEGDSLTVPTKLSQYERQGEIKTSLHGKPKTDIAAFENGGGDCYVPQRVIFLGVDESEALTEEKEITISKCSNTKVNDVQPVKKPHFKGVKKRKWIYDEPQNFPNSGMQRAVQAPRPQNKMSYHRNNKNRNAENASYIHVQRDAVRTVALNAPSRSRPTHGSYNKVHANREPKPNLSPDKYTSTSYNDSAWRKRIPFSKTYSKSEKIYPEPRRNGSK*