ENST00000550553.5 C12orf50

Information
Transcript ID
ENST00000550553.5
Genome
hg38
Position
chr12:87,980,122-88,029,419
Strand
-
CDS length
1,128
Amino acid length
376
Gene symbol
C12orf50
Gene type
protein-coding
Gene description
chromosome 12 open reading frame 50
Gene Entrez Gene ID
160419
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 87,980,122 87,980,356
11 87,983,103 87,983,195
10 87,985,850 87,986,053
9 87,986,312 87,986,416
8 87,989,264 87,989,371
7 87,994,633 87,994,743
6 87,996,374 87,996,487
5 87,996,569 87,996,646
4 87,998,035 87,998,190
3 88,026,488 88,026,608
2 88,026,951 88,027,070
1 88,029,340 88,029,419
CDS
Exon number Type Start Stop
12 CDS 87,980,331 87,980,356
11 CDS 87,983,103 87,983,195
10 CDS 87,985,850 87,986,053
9 CDS 87,986,312 87,986,416
8 CDS 87,989,264 87,989,371
7 CDS 87,994,633 87,994,743
6 CDS 87,996,374 87,996,487
5 CDS 87,996,569 87,996,646
4 CDS 87,998,035 87,998,190
3 CDS 88,026,488 88,026,608
2 CDS 88,026,951 88,026,962
Other genome
Genome Chromosome Start End Links
hg19 chr12 88,373,899 88,423,196 Link
CDS sequence
ATGGAAATGCAGCAAAACTGCAGCATTTCATGCTTCTGGGAAACTCAGCCTCTTGGTTGTGTGAAGATCAGCTGTATCTTTTATCACAGCAAACCTCGAAATATCAATGGATTATTTTTGCCACCAAGTAGCAATATCACACTACAGAAAGAAATTCAGGAAGGAATTCCACTCCAGTCCCAGAGTCAAGAACCTCTGAAACCTCAGGAAAATATATCACGACCCATCCACCATCCTTTAGTTTTAAAAACTAATTTTGAGGAAGAAGAGGAAGTAGATGAACAAAATGATGCTTCTAGTTTATGGACAAAGACCCCTGAAGAAATTGAAGAAAAAAGAGCAATAAAGGAGATGTGTTATAAATCTGGGGAATACTACAGATTTCATACTCCTCCAGATATTTTGTCATCAAAAAGCATGACACCTACAGCAGAAAAACAGTTAGAAAAGCCTTTGGAAAATGGCAGTGAATTGCAAGAAGGAGATAGTCTTACAGTTCCGACAAAACTTAGCCAATATGAAAGGCAAGGTGAAATAAAAACATCATTGCATGGGAAACCAAAGACTGACATTGCTGCTTTTGAAAATGGAGGAGGTGACTGTTATGTTCCACAGAGGGTCATATTTCTTGGAGTCGATGAAAGTGAAGCTTTAACTGAAGAGAAAGAAATCACCATATCAAAATGTTCAAATACTAAAGTGAATGATGTCCAGCCAGTGAAGAAGCCTCATTTTAAAGGTGTGAAGAAAAGAAAATGGATTTATGATGAACCACAGAACTTTCCTAACTCTGGAATGCAGAGAGCAGTACAGGCCCCAAGACCCCAAAATAAAATGAGTTATCACCGCAATAATAAAAATCGAAATGCGGAGAATGCATCCTATATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGGCCCACGCATGGGTCCTACAATAAAGTCCATGCTAACAGGGAACCCAAACCCAACCTCAGTCCAGACAAATATACGTCAACATCATATAATGATTCAGCCTGGCGAAAACGAATTCCTTTTTCAAAAACATATTCAAAAAGTGAAAAGATATATCCAGAGCCAAGAAGAAATGGGAGCAAGTAA
Amino sequence
MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNITLQKEIQEGIPLQSQSQEPLKPQENISRPIHHPLVLKTNFEEEEEVDEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHTPPDILSSKSMTPTAEKQLEKPLENGSELQEGDSLTVPTKLSQYERQGEIKTSLHGKPKTDIAAFENGGGDCYVPQRVIFLGVDESEALTEEKEITISKCSNTKVNDVQPVKKPHFKGVKKRKWIYDEPQNFPNSGMQRAVQAPRPQNKMSYHRNNKNRNAENASYIHVQRDAVRTVALNAPSRSRPTHGSYNKVHANREPKPNLSPDKYTSTSYNDSAWRKRIPFSKTYSKSEKIYPEPRRNGSK*