ENST00000550553.5 C12orf50

Information
Transcript ID
ENST00000550553.5
Genome
hg19
Position
chr12:88,373,899-88,423,196
Strand
-
CDS length
1,128
Amino acid length
376
Gene symbol
C12orf50
Gene type
protein-coding
Gene description
chromosome 12 open reading frame 50
Gene Entrez Gene ID
160419
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 88,373,899 88,374,133
11 88,376,880 88,376,972
10 88,379,627 88,379,830
9 88,380,089 88,380,193
8 88,383,041 88,383,148
7 88,388,410 88,388,520
6 88,390,151 88,390,264
5 88,390,346 88,390,423
4 88,391,812 88,391,967
3 88,420,265 88,420,385
2 88,420,728 88,420,847
1 88,423,117 88,423,196
CDS
Exon number Type Start Stop
12 CDS 88,374,108 88,374,133
11 CDS 88,376,880 88,376,972
10 CDS 88,379,627 88,379,830
9 CDS 88,380,089 88,380,193
8 CDS 88,383,041 88,383,148
7 CDS 88,388,410 88,388,520
6 CDS 88,390,151 88,390,264
5 CDS 88,390,346 88,390,423
4 CDS 88,391,812 88,391,967
3 CDS 88,420,265 88,420,385
2 CDS 88,420,728 88,420,739
Other genome
Genome Chromosome Start End Links
hg38 chr12 87,980,122 88,029,419 Link
CDS sequence
ATGGAAATGCAGCAAAACTGCAGCATTTCATGCTTCTGGGAAACTCAGCCTCTTGGTTGTGTGAAGATCAGCTGTATCTTTTATCACAGCAAACCTCGAAATATCAATGGATTATTTTTGCCACCAAGTAGCAATATCACACTACAGAAAGAAATTCAGGAAGGAATTCCACTCCAGTCCCAGAGTCAAGAACCTCTGAAACCTCAGGAAAATATATCACGACCCATCCACCATCCTTTAGTTTTAAAAACTAATTTTGAGGAAGAAGAGGAAGTAGATGAACAAAATGATGCTTCTAGTTTATGGACAAAGACCCCTGAAGAAATTGAAGAAAAAAGAGCAATAAAGGAGATGTGTTATAAATCTGGGGAATACTACAGATTTCATACTCCTCCAGATATTTTGTCATCAAAAAGCATGACACCTACAGCAGAAAAACAGTTAGAAAAGCCTTTGGAAAATGGCAGTGAATTGCAAGAAGGAGATAGTCTTACAGTTCCGACAAAACTTAGCCAATATGAAAGGCAAGGTGAAATAAAAACATCATTGCATGGGAAACCAAAGACTGACATTGCTGCTTTTGAAAATGGAGGAGGTGACTGTTATGTTCCACAGAGGGTCATATTTCTTGGAGTCGATGAAAGTGAAGCTTTAACTGAAGAGAAAGAAATCACCATATCAAAATGTTCAAATACTAAAGTGAATGATGTCCAGCCAGTGAAGAAGCCTCATTTTAAAGGTGTGAAGAAAAGAAAATGGATTTATGATGAACCACAGAACTTTCCTAACTCTGGAATGCAGAGAGCAGTACAGGCCCCAAGACCCCAAAATAAAATGAGTTATCACCGCAATAATAAAAATCGAAATGCGGAGAATGCATCCTATATCCACGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCAGCAGGCCCACGCATGGGTCCTACAATAAAGTCCATGCTAACAGGGAACCCAAACCCAACCTCAGTCCAGACAAATATACGTCAACATCATATAATGATTCAGCCTGGCGAAAACGAATTCCTTTTTCAAAAACATATTCAAAAAGTGAAAAGATATATCCAGAGCCAAGAAGAAATGGGAGCAAGTAA
Amino sequence
MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNITLQKEIQEGIPLQSQSQEPLKPQENISRPIHHPLVLKTNFEEEEEVDEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHTPPDILSSKSMTPTAEKQLEKPLENGSELQEGDSLTVPTKLSQYERQGEIKTSLHGKPKTDIAAFENGGGDCYVPQRVIFLGVDESEALTEEKEITISKCSNTKVNDVQPVKKPHFKGVKKRKWIYDEPQNFPNSGMQRAVQAPRPQNKMSYHRNNKNRNAENASYIHVQRDAVRTVALNAPSRSRPTHGSYNKVHANREPKPNLSPDKYTSTSYNDSAWRKRIPFSKTYSKSEKIYPEPRRNGSK*