ENST00000527972.6 SMTNL1

Information
Transcript ID
ENST00000527972.6
Genome
hg38
Position
chr11:57,537,595-57,550,272
Strand
+
CDS length
1,485
Amino acid length
495
Gene symbol
SMTNL1
Gene type
protein-coding
Gene description
smoothelin like 1
Gene Entrez Gene ID
219537
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,537,595 57,537,642
2 57,542,641 57,543,374
3 57,543,624 57,543,756
4 57,543,869 57,543,920
5 57,545,881 57,546,036
6 57,546,233 57,546,347
7 57,546,501 57,546,652
8 57,549,968 57,550,272
CDS
Exon number Type Start Stop
2 CDS 57,542,643 57,543,374
3 CDS 57,543,624 57,543,756
4 CDS 57,543,869 57,543,920
5 CDS 57,545,881 57,546,036
6 CDS 57,546,233 57,546,347
7 CDS 57,546,501 57,546,652
8 CDS 57,549,968 57,550,112
Other genome
Genome Chromosome Start End Links
hg19 chr11 57,305,068 57,317,745 Link
CDS sequence
ATGGAGCAGAAGGAAGGGAAGCTCTCTGAGGATGGGACCACCGTCTCCCCAGCTGCGGACAACCCTGAGATGTCAGGAGGTGGAGCCCCTGCAGAGGAGACCAAAGGCACAGCTGGAAAGGCCATCAATGAGGGGCCTCCCACTGAGTCAGGAAAGCAGGAAAAGGCACCAGCCGAGGACGGCATGTCAGCAGAACTCCAGGGGGAAGCAAATGGATTAGATGAGGTCAAAGTGGAATCTCAGAGGGAGGCTGGTGGGAAAGAGGATGCTGAGGCTGAACTTAAAAAGGAGGATGGTGAGAAGGAAGAGACCACTGTGGGTTCTCAGGAGATGACTGGCAGGAAAGAAGAGACCAAATCTGAACCCAAAGAGGCTGAGGAAAAGGAGAGCACGCTGGCCTCTGAGAAGCAGAAGGCTGAGGAGAAAGAGGCCAAACCTGAATCTGGGCAGAAAGCCGATGCCAATGACAGAGACAAGCCTGAACCTAAGGCAACAGTTGAGGAGGAGGACGCCAAGACAGCCTCTCAGGAGGAGACAGGCCAGAGGAAAGAGTGCAGCACTGAACCCAAGGAGAAGGCTACTGATGAAGAGGCCAAGGCTGAATCGCAGAAGGCTGTTGTGGAGGATGAGGCTAAGGCTGAACCCAAGGAGCCCGATGGGAAAGAGGAGGCCAAACATGGTGCAAAAGAGGAGGCTGATGCAAAAGAGGAGGCGGAGGATGCAGAGGAGGCAGAGCCAGGCAGTCCCAGCGAAGAGCAGGAGCAGGACGTGGAAAAAGAGCCAGAGGGAGGGGCAGGGGTGATTCCCAGCTCCCCAGAGGAGTGGCCTGAGAGCCCCACTGGGGAGGGGCACAACCTCAGCACAGATGGGCTGGGTCCAGACTGTGTAGCTTCCGGACAGACCAGTCCTTCAGCCAGTGAGTCTTCACCCAGCGACGTGCCCCAGAGTCCCCCTGAGTCCCCTTCCTCAGGGGAGAAGAAGGAGAAGGCACCAGAGCGCAGGGTATCAGCCCCTGCTCGGCCCCGGGGGCCCCGGGCACAGAACCGCAAAGCCATCGTGGACAAGTTTGGCGGGGCAGCTTCCGGCCCCACGGCCTTGTTCCGCAACACTAAGGCAGCCGGGGCAGCCATTGGTGGTGTCAAGAACATGCTCTTGGAGTGGTGCCGAGCCATGACAAAAAAATACGAGCATGTGGACATCCAGAACTTCTCCTCCAGCTGGAGCAGTGGTATGGCCTTCTGTGCCCTCATCCACAAGTTCTTCCCTGACGCCTTTGACTACGCAGAGCTGGATCCCGCAAAGCGCCGGCACAACTTCACCCTGGCCTTCTCCACAGCAGAGAAACTGGCTGACTGTGCTCAGCTGCTGGACGTGGATGACATGGTGCGGTTGGCTGTGCCCGACTCCAAGTGCGTCTACACATACATCCAGGAACTGTACCGCAGCCTTGTGCAGAAAGGACTGGTGAAGACCAAGAAGAAGTGA
Amino sequence
MEQKEGKLSEDGTTVSPAADNPEMSGGGAPAEETKGTAGKAINEGPPTESGKQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGKEDAEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEAKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQDVEKEPEGGAGVIPSSPEEWPESPTGEGHNLSTDGLGPDCVASGQTSPSASESSPSDVPQSPPESPSSGEKKEKAPERRVSAPARPRGPRAQNRKAIVDKFGGAASGPTALFRNTKAAGAAIGGVKNMLLEWCRAMTKKYEHVDIQNFSSSWSSGMAFCALIHKFFPDAFDYAELDPAKRRHNFTLAFSTAEKLADCAQLLDVDDMVRLAVPDSKCVYTYIQELYRSLVQKGLVKTKKK*