ENST00000527972.6 SMTNL1

Information
Transcript ID
ENST00000527972.6
Genome
hg19
Position
chr11:57,305,068-57,317,745
Strand
+
CDS length
1,485
Amino acid length
495
Gene symbol
SMTNL1
Gene type
protein-coding
Gene description
smoothelin like 1
Gene Entrez Gene ID
219537
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,305,068 57,305,115
2 57,310,114 57,310,847
3 57,311,097 57,311,229
4 57,311,342 57,311,393
5 57,313,354 57,313,509
6 57,313,706 57,313,820
7 57,313,974 57,314,125
8 57,317,441 57,317,745
CDS
Exon number Type Start Stop
2 CDS 57,310,116 57,310,847
3 CDS 57,311,097 57,311,229
4 CDS 57,311,342 57,311,393
5 CDS 57,313,354 57,313,509
6 CDS 57,313,706 57,313,820
7 CDS 57,313,974 57,314,125
8 CDS 57,317,441 57,317,585
Other genome
Genome Chromosome Start End Links
hg38 chr11 57,537,595 57,550,272 Link
CDS sequence
ATGGAGCAGAAGGAAGGGAAGCTCTCTGAGGATGGGACCACCGTCTCCCCAGCTGCGGACAACCCTGAGATGTCAGGAGGTGGAGCCCCTGCAGAGGAGACCAAAGGCACAGCTGGAAAGGCCATCAATGAGGGGCCTCCCACTGAGTCAGGAAAGCAGGAAAAGGCACCAGCCGAGGACGGCATGTCAGCAGAACTCCAGGGGGAAGCAAATGGATTAGATGAGGTCAAAGTGGAATCTCAGAGGGAGGCTGGTGGGAAAGAGGATGCTGAGGCTGAACTTAAAAAGGAGGATGGTGAGAAGGAAGAGACCACTGTGGGTTCTCAGGAGATGACTGGCAGGAAAGAAGAGACCAAATCTGAACCCAAAGAGGCTGAGGAAAAGGAGAGCACGCTGGCCTCTGAGAAGCAGAAGGCTGAGGAGAAAGAGGCCAAACCTGAATCTGGGCAGAAAGCCGATGCCAATGACAGAGACAAGCCTGAACCTAAGGCAACAGTTGAGGAGGAGGACGCCAAGACAGCCTCTCAGGAGGAGACAGGCCAGAGGAAAGAGTGCAGCACTGAACCCAAGGAGAAGGCTACTGATGAAGAGGCCAAGGCTGAATCGCAGAAGGCTGTTGTGGAGGATGAGGCTAAGGCTGAACCCAAGGAGCCCGATGGGAAAGAGGAGGCCAAACATGGTGCAAAAGAGGAGGCTGATGCAAAAGAGGAGGCGGAGGATGCAGAGGAGGCAGAGCCAGGCAGTCCCAGCGAAGAGCAGGAGCAGGACGTGGAAAAAGAGCCAGAGGGAGGGGCAGGGGTGATTCCCAGCTCCCCAGAGGAGTGGCCTGAGAGCCCCACTGGGGAGGGGCACAACCTCAGCACAGATGGGCTGGGTCCAGACTGTGTAGCTTCCGGACAGACCAGTCCTTCAGCCAGTGAGTCTTCACCCAGCGACGTGCCCCAGAGTCCCCCTGAGTCCCCTTCCTCAGGGGAGAAGAAGGAGAAGGCACCAGAGCGCAGGGTATCAGCCCCTGCTCGGCCCCGGGGGCCCCGGGCACAGAACCGCAAAGCCATCGTGGACAAGTTTGGCGGGGCAGCTTCCGGCCCCACGGCCTTGTTCCGCAACACTAAGGCAGCCGGGGCAGCCATTGGTGGTGTCAAGAACATGCTCTTGGAGTGGTGCCGAGCCATGACAAAAAAATACGAGCATGTGGACATCCAGAACTTCTCCTCCAGCTGGAGCAGTGGTATGGCCTTCTGTGCCCTCATCCACAAGTTCTTCCCTGACGCCTTTGACTACGCAGAGCTGGATCCCGCAAAGCGCCGGCACAACTTCACCCTGGCCTTCTCCACAGCAGAGAAACTGGCTGACTGTGCTCAGCTGCTGGACGTGGATGACATGGTGCGGTTGGCTGTGCCCGACTCCAAGTGCGTCTACACATACATCCAGGAACTGTACCGCAGCCTTGTGCAGAAAGGACTGGTGAAGACCAAGAAGAAGTGA
Amino sequence
MEQKEGKLSEDGTTVSPAADNPEMSGGGAPAEETKGTAGKAINEGPPTESGKQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGKEDAEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEAKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQDVEKEPEGGAGVIPSSPEEWPESPTGEGHNLSTDGLGPDCVASGQTSPSASESSPSDVPQSPPESPSSGEKKEKAPERRVSAPARPRGPRAQNRKAIVDKFGGAASGPTALFRNTKAAGAAIGGVKNMLLEWCRAMTKKYEHVDIQNFSSSWSSGMAFCALIHKFFPDAFDYAELDPAKRRHNFTLAFSTAEKLADCAQLLDVDDMVRLAVPDSKCVYTYIQELYRSLVQKGLVKTKKK*