ENST00000482399.5 VPS52

Information
Transcript ID
ENST00000482399.5
Genome
hg38
Position
chr6:33,250,272-33,271,876
Strand
-
CDS length
267
Amino acid length
89
Gene symbol
VPS52
Gene type
protein-coding
Gene description
VPS52 subunit of GARP complex
Gene Entrez Gene ID
6293
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
19 33,250,272 33,250,987
18 33,251,518 33,251,636
17 33,251,860 33,251,971
16 33,263,484 33,263,549
15 33,263,772 33,263,879
14 33,264,008 33,264,103
13 33,264,374 33,264,497
12 33,264,782 33,264,900
11 33,266,557 33,266,712
10 33,267,188 33,267,321
9 33,267,682 33,267,739
8 33,267,865 33,267,997
7 33,268,108 33,268,208
6 33,268,499 33,268,649
5 33,269,014 33,269,189
4 33,269,490 33,269,557
3 33,269,744 33,269,819
2 33,270,199 33,270,283
1 33,271,137 33,271,876
CDS
Exon number Type Start Stop
1 CDS 33,271,409 33,271,675
Other genome
Genome Chromosome Start End Links
hg19 chr6 33,218,049 33,239,653 Link
CDS sequence
ATGGCCGCCGCTGCGACCATGGCGGCTGCGGCCCGGGAACTGGTGTTGCGGGCTGGGACCTCAGATATGGAGGAGGAAGAGGGCCCGCTGGTGAGAGCGCGGAGCTGTTTCTCCTCCGTAGTTCCGGTGCTCCTAGCTTCAGAAAGACCTGAGCTGGGTTTAGGCACAAGGGTGGGAACTTGGCTGCTACCCGTGATATTACCTGTTTGGCTCCCCGTACCCTTCCCTGTGATCAGACCCGACCCTGAGCGGGACCCTAGTGGCTGA
Amino sequence
MAAAATMAAAARELVLRAGTSDMEEEEGPLVRARSCFSSVVPVLLASERPELGLGTRVGTWLLPVILPVWLPVPFPVIRPDPERDPSG*