ENST00000310496.9 RFNG

Information
Transcript ID
ENST00000310496.9
Genome
hg38
Position
chr17:82,047,902-82,051,811
Strand
-
CDS length
996
Amino acid length
332
Gene symbol
RFNG
Gene type
protein-coding
Gene description
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene Entrez Gene ID
5986
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 82,047,902 82,048,807
7 82,049,031 82,049,116
6 82,049,677 82,049,842
5 82,049,918 82,050,006
4 82,050,402 82,050,555
3 82,050,662 82,050,764
2 82,051,294 82,051,342
1 82,051,500 82,051,811
CDS
Exon number Type Start Stop
8 CDS 82,048,726 82,048,807
7 CDS 82,049,031 82,049,116
6 CDS 82,049,677 82,049,842
5 CDS 82,049,918 82,050,006
4 CDS 82,050,402 82,050,555
3 CDS 82,050,662 82,050,764
2 CDS 82,051,294 82,051,342
1 CDS 82,051,500 82,051,766
Other genome
Genome Chromosome Start End Links
hg19 chr17 80,005,778 80,009,687 Link
CDS sequence
ATGAGCCGCGCGCGTGGGGCGCTGTGCCGGGCCTGCCTCGCGCTGGCCGCGGCCCTGGCCGCGCTGCTGTTACTGCCGCTGCCGCTGCCCCGCGCGCCCGCCCCGGCCCGGACCCCCGCCCCGGCCCCGCGCGCGCCCCCGTCCCGGCCCGCTGCCCCCAGCCTGCGGCCTGACGACGTCTTCATCGCCGTCAAGACCACCCGGAAGAACCACGGGCCGCGCCTGCGGCTGCTGCTGCGCACCTGGATCTCCCGGGCCCGCCAGCAGACGTTTATCTTCACCGACGGGGACGACCCTGAGCTCGAGCTCCAGGGCGGCGACCGTGTCATCAACACCAACTGCTCGGCGGTGCGCACTCGTCAGGCCCTCTGCTGCAAGATGTCCGTGGAGTATGACAAGTTCATTGAGTCCGGGCGCAAGTGGTTTTGCCACGTGGATGATGACAATTATGTGAACGCCAGGAGCCTCCTGCACCTGCTCTCCAGCTTCTCACCCAGCCAGGACGTCTACCTGGGGCGGCCCAGCCTGGACCACCCCATTGAGGCCACCGAGAGGGTCCAGGGTGGCAGAACTGTGACCACGGTCAAGTTCTGGTTTGCTACTGGTGGGGCCGGGTTCTGCCTCAGCAGAGGCCTTGCCCTCAAGATGAGCCCATGGGCCAGCCTGGGCAGCTTCATGAGCACAGCTGAGCAGGTGCGGCTGCCGGATGACTGCACAGTTGGCTACATCGTGGAGGGGCTCCTGGGCGCCCGCCTGCTGCACAGCCCCCTCTTCCACTCTCACCTGGAGAACCTGCAGAGGCTGCCGCCCGACACCCTGCTCCAGCAGGTTACCTTGAGCCATGGGGGTCCTGAGAACCCACATAACGTGGTGAACGTGGCTGGAGGCTTCAGCCTGCATCAAGACCCCACACGGTTTAAGTCTATCCATTGTCTTCTGTACCCAGACACGGACTGGTGTCCCAGGCAGAAACAGGGCGCCCCGACCTCTCGGTGA
Amino sequence
MSRARGALCRACLALAAALAALLLLPLPLPRAPAPARTPAPAPRAPPSRPAAPSLRPDDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIFTDGDDPELELQGGDRVINTNCSAVRTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNARSLLHLLSSFSPSQDVYLGRPSLDHPIEATERVQGGRTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAEQVRLPDDCTVGYIVEGLLGARLLHSPLFHSHLENLQRLPPDTLLQQVTLSHGGPENPHNVVNVAGGFSLHQDPTRFKSIHCLLYPDTDWCPRQKQGAPTSR*