ENST00000310496.9 RFNG

Information
Transcript ID
ENST00000310496.9
Genome
hg19
Position
chr17:80,005,778-80,009,687
Strand
-
CDS length
996
Amino acid length
332
Gene symbol
RFNG
Gene type
protein-coding
Gene description
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene Entrez Gene ID
5986
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 80,005,778 80,006,683
7 80,006,907 80,006,992
6 80,007,553 80,007,718
5 80,007,794 80,007,882
4 80,008,278 80,008,431
3 80,008,538 80,008,640
2 80,009,170 80,009,218
1 80,009,376 80,009,687
CDS
Exon number Type Start Stop
8 CDS 80,006,602 80,006,683
7 CDS 80,006,907 80,006,992
6 CDS 80,007,553 80,007,718
5 CDS 80,007,794 80,007,882
4 CDS 80,008,278 80,008,431
3 CDS 80,008,538 80,008,640
2 CDS 80,009,170 80,009,218
1 CDS 80,009,376 80,009,642
Other genome
Genome Chromosome Start End Links
hg38 chr17 82,047,902 82,051,811 Link
CDS sequence
ATGAGCCGCGCGCGTGGGGCGCTGTGCCGGGCCTGCCTCGCGCTGGCCGCGGCCCTGGCCGCGCTGCTGTTACTGCCGCTGCCGCTGCCCCGCGCGCCCGCCCCGGCCCGGACCCCCGCCCCGGCCCCGCGCGCGCCCCCGTCCCGGCCCGCTGCCCCCAGCCTGCGGCCTGACGACGTCTTCATCGCCGTCAAGACCACCCGGAAGAACCACGGGCCGCGCCTGCGGCTGCTGCTGCGCACCTGGATCTCCCGGGCCCGCCAGCAGACGTTTATCTTCACCGACGGGGACGACCCTGAGCTCGAGCTCCAGGGCGGCGACCGTGTCATCAACACCAACTGCTCGGCGGTGCGCACTCGTCAGGCCCTCTGCTGCAAGATGTCCGTGGAGTATGACAAGTTCATTGAGTCCGGGCGCAAGTGGTTTTGCCACGTGGATGATGACAATTATGTGAACGCCAGGAGCCTCCTGCACCTGCTCTCCAGCTTCTCACCCAGCCAGGACGTCTACCTGGGGCGGCCCAGCCTGGACCACCCCATTGAGGCCACCGAGAGGGTCCAGGGTGGCAGAACTGTGACCACGGTCAAGTTCTGGTTTGCTACTGGTGGGGCCGGGTTCTGCCTCAGCAGAGGCCTTGCCCTCAAGATGAGCCCATGGGCCAGCCTGGGCAGCTTCATGAGCACAGCTGAGCAGGTGCGGCTGCCGGATGACTGCACAGTTGGCTACATCGTGGAGGGGCTCCTGGGCGCCCGCCTGCTGCACAGCCCCCTCTTCCACTCTCACCTGGAGAACCTGCAGAGGCTGCCGCCCGACACCCTGCTCCAGCAGGTTACCTTGAGCCATGGGGGTCCTGAGAACCCACATAACGTGGTGAACGTGGCTGGAGGCTTCAGCCTGCATCAAGACCCCACACGGTTTAAGTCTATCCATTGTCTTCTGTACCCAGACACGGACTGGTGTCCCAGGCAGAAACAGGGCGCCCCGACCTCTCGGTGA
Amino sequence
MSRARGALCRACLALAAALAALLLLPLPLPRAPAPARTPAPAPRAPPSRPAAPSLRPDDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIFTDGDDPELELQGGDRVINTNCSAVRTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNARSLLHLLSSFSPSQDVYLGRPSLDHPIEATERVQGGRTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAEQVRLPDDCTVGYIVEGLLGARLLHSPLFHSHLENLQRLPPDTLLQQVTLSHGGPENPHNVVNVAGGFSLHQDPTRFKSIHCLLYPDTDWCPRQKQGAPTSR*