ENST00000585388.2 LSM12
Information
- Transcript ID
- ENST00000585388.2
- Genome
- hg38
- Position
- chr17:44,036,143-44,066,659
- Strand
- -
- CDS length
- 693
- Amino acid length
- 231
- Gene symbol
- LSM12
- Gene type
- protein-coding
- Gene description
- LSM12 homolog
- Gene Entrez Gene ID
- 124801
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 44,036,143 | 44,036,300 |
| 5 | 44,036,862 | 44,037,102 |
| 4 | 44,037,412 | 44,037,538 |
| 3 | 44,040,147 | 44,040,256 |
| 2 | 44,063,801 | 44,063,934 |
| 1 | 44,066,464 | 44,066,659 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 44,036,905 | 44,037,102 |
| 4 | CDS | 44,037,412 | 44,037,538 |
| 3 | CDS | 44,040,147 | 44,040,256 |
| 2 | CDS | 44,063,801 | 44,063,934 |
| 1 | CDS | 44,066,464 | 44,066,587 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 42,113,511 | 42,144,027 | Link |
CDS sequence
ATGGCGGCTCCTCCGGGCGAGTACTTCAGCGTTGGGAGCCAGGTGTCGTGCCGGACGTGCCAGGAGCAGCGGCTGCAGGGCGAGGTGGTAGCCTTTGACTACCAATCCAAAATGCTGGCTTTAAAATGTCCCTCTTCCAGTGGAAAGCCCAACCATGCAGACATCTTGCTCATAAACTTACAGTATGTTTCAGAAGTGGAAATAATTAATGACCGAACAGAAACCCCTCCTCCCCTAGCTTCACTCAATGTTAGTAAGCTTGCCAGCAAAGCACGGACAGAGAAGGAGGAGAAGCTGAGCCAGGCCTATGCAATCAGTGCTGGTGTCTCTCTAGAGGGCCAGCAGCTCTTCCAGACCATTCACAAGACCATTAAAGACTGTAAATGGCAAGAAAAAAACATCGTAGTCATGGAAGAAGTTGTTATTACACCCCCATATCAAGTGGAAAACTGTAAAGGCAAAGAGGGGAGTGCACTGAGCCATGTACGCAAAATAAGACAGAGTCTCGCTCTGTCGCCCACGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTACCTGGGACTACAGGCGTATGCCACCACACCCGGCTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTGA
Amino sequence
MAAPPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYQSKMLALKCPSSSGKPNHADILLINLQYVSEVEIINDRTETPPPLASLNVSKLASKARTEKEEKLSQAYAISAGVSLEGQQLFQTIHKTIKDCKWQEKNIVVMEEVVITPPYQVENCKGKEGSALSHVRKIRQSLALSPTLECSGAISAHCNLRLPGSSDSPASASRVPGTTGVCHHTRLEMGFHHVGQAGLELLT*