ENST00000587209.5 PSMC3IP

Information
Transcript ID
ENST00000587209.5
Genome
hg38
Position
chr17:42,572,343-42,577,697
Strand
-
CDS length
465
Amino acid length
155
Gene symbol
PSMC3IP
Gene type
protein-coding
Gene description
PSMC3 interacting protein
Gene Entrez Gene ID
29893
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 42,572,343 42,573,024
6 42,573,107 42,573,166
5 42,573,311 42,573,364
4 42,573,478 42,573,623
3 42,574,099 42,574,210
2 42,577,213 42,577,302
1 42,577,461 42,577,697
CDS
Exon number Type Start Stop
7 CDS 42,572,968 42,573,024
6 CDS 42,573,107 42,573,166
5 CDS 42,573,311 42,573,364
4 CDS 42,573,478 42,573,623
3 CDS 42,574,099 42,574,210
2 CDS 42,577,213 42,577,248
Other genome
Genome Chromosome Start End Links
hg19 chr17 40,724,361 40,729,715 Link
CDS sequence
ATGTACGGCAAGCAGAAGATCTATTTTGCGGATCAGGACCAGTTTGACATGGTGAGTGATGCTGACCTTCAAGTCCTAGATGGCAAAATCGTGGCCCTCACTGCTAAGGTGCAGAGCTTGCAGCAGAGCTGCCGCTACATGGAGGCTGAGCTCAAGGAATTATCTAGTGCCCTGACCACACCAGAGATGCAGAAAGAAATCCAGGAGTTAAAGAAGGAATGCGCTGGCTACAGAGAGAGATTGAAGAACATTAAAGCAGCTACCAATCATGTGACTCCAGAAGAGAAAGAGCAGGTGTACAGAGAGAGGCAGAAGTACTGTAAGGAGTGGAGGAAGAGGAAGAGGATGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGAGGAAGTTGGGATAGAGACGGATGAAGATTACAACGTCACACTCCCAGACCCCTGA
Amino sequence
MYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP*