ENST00000587209.5 PSMC3IP
Information
- Transcript ID
- ENST00000587209.5
- Genome
- hg19
- Position
- chr17:40,724,361-40,729,715
- Strand
- -
- CDS length
- 465
- Amino acid length
- 155
- Gene symbol
- PSMC3IP
- Gene type
- protein-coding
- Gene description
- PSMC3 interacting protein
- Gene Entrez Gene ID
- 29893
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 40,724,361 | 40,725,042 |
| 6 | 40,725,125 | 40,725,184 |
| 5 | 40,725,329 | 40,725,382 |
| 4 | 40,725,496 | 40,725,641 |
| 3 | 40,726,117 | 40,726,228 |
| 2 | 40,729,231 | 40,729,320 |
| 1 | 40,729,479 | 40,729,715 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 40,724,986 | 40,725,042 |
| 6 | CDS | 40,725,125 | 40,725,184 |
| 5 | CDS | 40,725,329 | 40,725,382 |
| 4 | CDS | 40,725,496 | 40,725,641 |
| 3 | CDS | 40,726,117 | 40,726,228 |
| 2 | CDS | 40,729,231 | 40,729,266 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 42,572,343 | 42,577,697 | Link |
CDS sequence
ATGTACGGCAAGCAGAAGATCTATTTTGCGGATCAGGACCAGTTTGACATGGTGAGTGATGCTGACCTTCAAGTCCTAGATGGCAAAATCGTGGCCCTCACTGCTAAGGTGCAGAGCTTGCAGCAGAGCTGCCGCTACATGGAGGCTGAGCTCAAGGAATTATCTAGTGCCCTGACCACACCAGAGATGCAGAAAGAAATCCAGGAGTTAAAGAAGGAATGCGCTGGCTACAGAGAGAGATTGAAGAACATTAAAGCAGCTACCAATCATGTGACTCCAGAAGAGAAAGAGCAGGTGTACAGAGAGAGGCAGAAGTACTGTAAGGAGTGGAGGAAGAGGAAGAGGATGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGAGGAAGTTGGGATAGAGACGGATGAAGATTACAACGTCACACTCCCAGACCCCTGA
Amino sequence
MYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP*