ENST00000549043.5 COPZ1

Information
Transcript ID
ENST00000549043.5
Genome
hg38
Position
chr12:54,325,129-54,351,102
Strand
+
CDS length
558
Amino acid length
186
Gene symbol
COPZ1
Gene type
protein-coding
Gene description
COPI coat complex subunit zeta 1
Gene Entrez Gene ID
22818
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 54,325,129 54,325,181
2 54,340,463 54,340,615
3 54,342,206 54,342,287
4 54,343,225 54,343,316
5 54,345,460 54,345,515
6 54,347,767 54,347,844
7 54,348,000 54,348,051
8 54,349,620 54,349,658
9 54,350,476 54,351,102
CDS
Exon number Type Start Stop
2 CDS 54,340,505 54,340,615
3 CDS 54,342,206 54,342,287
4 CDS 54,343,225 54,343,316
5 CDS 54,345,460 54,345,515
6 CDS 54,347,767 54,347,844
7 CDS 54,348,000 54,348,051
8 CDS 54,349,620 54,349,658
9 CDS 54,350,476 54,350,523
Other genome
Genome Chromosome Start End Links
hg19 chr12 54,718,913 54,744,886 Link
CDS sequence
ATGGGAGGCTTCAGGACTGAAGGTATGTTCGTATCTCTTCAGGAACCTTCCCTGTATACTGTCAAAGCCATCCTGATTCTGGACAATGATGGAGATCGACTTTTTGCCAAGTACTATGACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAGAACATTTTCAACAAGACCCATCGGACTGACAGTGAAATTGCCCTCTTGGAAGGCCTGACAGTGGTATACAAAAGCAGTATAGATCTCTATTTCTATGTGATTGGCAGCTCCTATGAAAATGAGCTGATGCTTATGGCTGTTCTGAACTGTCTCTTCGACTCATTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCACTGCTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGTAGATGGAGGGGTGATCCTAGAGAGTGATCCCCAGCAGGTGGTACACCGGGTGGCATTAAGGGGTGAAGATGTCCCCCTTACGGAGCAGACCGTGTCTCAGGTGCTGCAGTCAGCCAAAGAACAGATCAAGTGGTCACTCCTTCGGTGA
Amino sequence
MGGFRTEGMFVSLQEPSLYTVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR*