ENST00000549043.5 COPZ1

Information
Transcript ID
ENST00000549043.5
Genome
hg19
Position
chr12:54,718,913-54,744,886
Strand
+
CDS length
558
Amino acid length
186
Gene symbol
COPZ1
Gene type
protein-coding
Gene description
COPI coat complex subunit zeta 1
Gene Entrez Gene ID
22818
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 54,718,913 54,718,965
2 54,734,247 54,734,399
3 54,735,990 54,736,071
4 54,737,009 54,737,100
5 54,739,244 54,739,299
6 54,741,551 54,741,628
7 54,741,784 54,741,835
8 54,743,404 54,743,442
9 54,744,260 54,744,886
CDS
Exon number Type Start Stop
2 CDS 54,734,289 54,734,399
3 CDS 54,735,990 54,736,071
4 CDS 54,737,009 54,737,100
5 CDS 54,739,244 54,739,299
6 CDS 54,741,551 54,741,628
7 CDS 54,741,784 54,741,835
8 CDS 54,743,404 54,743,442
9 CDS 54,744,260 54,744,307
Other genome
Genome Chromosome Start End Links
hg38 chr12 54,325,129 54,351,102 Link
CDS sequence
ATGGGAGGCTTCAGGACTGAAGGTATGTTCGTATCTCTTCAGGAACCTTCCCTGTATACTGTCAAAGCCATCCTGATTCTGGACAATGATGGAGATCGACTTTTTGCCAAGTACTATGACGACACCTACCCCAGTGTCAAGGAGCAAAAGGCCTTTGAGAAGAACATTTTCAACAAGACCCATCGGACTGACAGTGAAATTGCCCTCTTGGAAGGCCTGACAGTGGTATACAAAAGCAGTATAGATCTCTATTTCTATGTGATTGGCAGCTCCTATGAAAATGAGCTGATGCTTATGGCTGTTCTGAACTGTCTCTTCGACTCATTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCACTGCTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGTAGATGGAGGGGTGATCCTAGAGAGTGATCCCCAGCAGGTGGTACACCGGGTGGCATTAAGGGGTGAAGATGTCCCCCTTACGGAGCAGACCGTGTCTCAGGTGCTGCAGTCAGCCAAAGAACAGATCAAGTGGTCACTCCTTCGGTGA
Amino sequence
MGGFRTEGMFVSLQEPSLYTVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR*