ENST00000535759.2 TPRX1

Information
Transcript ID
ENST00000535759.2
Genome
hg38
Position
chr19:47,801,775-47,819,051
Strand
-
CDS length
1,527
Amino acid length
509
Gene symbol
TPRX1
Gene type
protein-coding
Gene description
tetrapeptide repeat homeobox 1
Gene Entrez Gene ID
284355
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 47,801,775 47,802,980
3 47,803,504 47,803,673
2 47,818,468 47,818,538
1 47,818,972 47,819,051
CDS
Exon number Type Start Stop
4 CDS 47,801,775 47,802,980
3 CDS 47,803,504 47,803,673
2 CDS 47,818,468 47,818,538
1 CDS 47,818,972 47,819,051
Other genome
Genome Chromosome Start End Links
hg19 chr19 48,305,032 48,322,308 Link
CDS sequence
ATGGATGAAGCTGGAAACCATCATTCTGAGCAAACTATCACAAGGACAGAAAACCAAACACCGCATGCTCTCGCTCATAGGAGGATGGGGCCCTGTCTGTCTTGTTCTCAGCTGTATTCCCAGTACCTAGGACTGTCCCAGACACACAGCAGCCCTCCCCTGGCCCTGGACCCTCCAAGGAGACAGCGGCAGGAGCGCACGGTCTACACTGAAAGCCAGCAGAAAGTGCTAGAATTTTACTTTCAGAAGGACCAGTACCCGAACTACGACCAGCGACTGAATCTGGCGGAGATGCTCAGCCTCAGGGAGCAACAGCTGCAGGTGTGGTTCAAGAATCGCCGCGCCAAACTAGCTCGGGAGCGGCGGCTCCAGCAGCAGCCCCAGCGCGTCCCTGGGCAGAGAGGCCGAGGAGCCCGCGCTGCGCCCCTAGTCCCTGCAGCCTCTGCCTCCGCACCTCAGCGGGGCCCCTCGGGAATCCTTCCAGCGGCGGAACCCACGATCTGCAGCCTCCACCAGGCCTGGGGTGGCCCTGGGTGCAGAGCCCAGAAGGGCATCCCAGCTGCCCTGAGTCCAGGCCCTGGCCCGATCCCTGCCCCAATCCCAGGCCCAGCCCAGATCCCAGGCCCACTCCCTGGCTCAATTCCAGGCCCAATTCCAGGCCCAGCTCAGATCCCAAGCCCGATCCCAGCCCCAATCCCAGGCCCAATTTCAGGCCCAGTCCAGATCCCAGGCCCATTCCGTGGCCCAATCCCAGGCCCAATTTCAGGCCCAGCCCCGATCCCAGGCCCAATCTCAGGCCCATTCTCAGGCCCAAACCCAGGCCCGATCCCAGGCCCAAACCCAGGCCCGATCCCAGGCCCAATCTCAGGCCCGATCCCAGGCCCAATCTCAGTCCCGATCCCAGGCCCGATCCCAGGCCCAATCTCAGGCCCAATCTCAGGCCCAAACCCAGGCCCGATCCCAGGCCCAATCCCAGGCCCAATCTCAGGCCCGAACCCAGGCCCGATCCCAGGCCCAATCTCAGGCCCGAACCCAGGCCTGATCCCAGGCCCAATCCCAGGCCCAATCTCAGGCCCAGGCCCAATTATAGGCCCGATTCCCAGCCCAGCCCAGATCCCAGGCCCAGGCAGACTCCAAGGCCCAGGTCCCATCTTAAGTCCTGGCCGGATGCGAAGCCCTGGCTCACTTCCAGGCCTAGCCCCGATTTTAGGCCCAGGCTCAGGCCCAGGCTCAGGCTCAGTCCCAGCTCCAATCCCAGGCCCAGGATCACTCCCAGCCCCAGCCCCCTTATGGCCTCAGAGCCCCGATGCCTCCGACTTCTTGCCAGACACCCAGTTATTCCCTCACTTCACAGAGCTGCTCCTACCCCTAGACCCCTTGGAGGGATCCTCAGTCTCCACCATGACCTCTCAGTACCAAGAAGGGGATGACTCTATGGGCAAAAAACACTCAGGGTCTCAGCCCCAAGAGGAGGGTGGCTCTGTGAATGAAAATCACTCAGGCCCCAGGTTATTACTGGATTTATAG
Amino sequence
MDEAGNHHSEQTITRTENQTPHALAHRRMGPCLSCSQLYSQYLGLSQTHSSPPLALDPPRRQRQERTVYTESQQKVLEFYFQKDQYPNYDQRLNLAEMLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPSGILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEGSSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL*