ENST00000535759.2 TPRX1

Information
Transcript ID
ENST00000535759.2
Genome
hg19
Position
chr19:48,305,032-48,322,308
Strand
-
CDS length
1,527
Amino acid length
509
Gene symbol
TPRX1
Gene type
protein-coding
Gene description
tetrapeptide repeat homeobox 1
Gene Entrez Gene ID
284355
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 48,305,032 48,306,237
3 48,306,761 48,306,930
2 48,321,725 48,321,795
1 48,322,229 48,322,308
CDS
Exon number Type Start Stop
4 CDS 48,305,032 48,306,237
3 CDS 48,306,761 48,306,930
2 CDS 48,321,725 48,321,795
1 CDS 48,322,229 48,322,308
Other genome
Genome Chromosome Start End Links
hg38 chr19 47,801,775 47,819,051 Link
CDS sequence
ATGGATGAAGCTGGAAACCATCATTCTGAGCAAACTATCACAAGGACAGAAAACCAAACACCGCATGCTCTCGCTCATAGGAGGATGGGGCCCTGTCTGTCTTGTTCTCAGCTGTATTCCCAGTACCTAGGACTGTCCCAGACACACAGCAGCCCTCCCCTGGCCCTGGACCCTCCAAGGAGACAGCGGCAGGAGCGCACGGTCTACACTGAAAGCCAGCAGAAAGTGCTAGAATTTTACTTTCAGAAGGACCAGTACCCGAACTACGACCAGCGACTGAATCTGGCGGAGATGCTCAGCCTCAGGGAGCAACAGCTGCAGGTGTGGTTCAAGAATCGCCGCGCCAAACTAGCTCGGGAGCGGCGGCTCCAGCAGCAGCCCCAGCGCGTCCCTGGGCAGAGAGGCCGAGGAGCCCGCGCTGCGCCCCTAGTCCCTGCAGCCTCTGCCTCCGCACCTCAGCGGGGCCCCTCGGGAATCCTTCCAGCGGCGGAACCCACGATCTGCAGCCTCCACCAGGCCTGGGGTGGCCCTGGGTGCAGAGCCCAGAAGGGCATCCCAGCTGCCCTGAGTCCAGGCCCTGGCCCGATCCCTGCCCCAATCCCAGGCCCAGCCCAGATCCCAGGCCCACTCCCTGGCTCAATTCCAGGCCCAATTCCAGGCCCAGCTCAGATCCCAAGCCCGATCCCAGCCCCAATCCCAGGCCCAATTTCAGGCCCAGTCCAGATCCCAGGCCCATTCCGTGGCCCAATCCCAGGCCCAATTTCAGGCCCAGCCCCGATCCCAGGCCCAATCTCAGGCCCATTCTCAGGCCCAAACCCAGGCCCGATCCCAGGCCCAAACCCAGGCCCGATCCCAGGCCCAATCTCAGGCCCGATCCCAGGCCCAATCTCAGTCCCGATCCCAGGCCCGATCCCAGGCCCAATCTCAGGCCCAATCTCAGGCCCAAACCCAGGCCCGATCCCAGGCCCAATCCCAGGCCCAATCTCAGGCCCGAACCCAGGCCCGATCCCAGGCCCAATCTCAGGCCCGAACCCAGGCCTGATCCCAGGCCCAATCCCAGGCCCAATCTCAGGCCCAGGCCCAATTATAGGCCCGATTCCCAGCCCAGCCCAGATCCCAGGCCCAGGCAGACTCCAAGGCCCAGGTCCCATCTTAAGTCCTGGCCGGATGCGAAGCCCTGGCTCACTTCCAGGCCTAGCCCCGATTTTAGGCCCAGGCTCAGGCCCAGGCTCAGGCTCAGTCCCAGCTCCAATCCCAGGCCCAGGATCACTCCCAGCCCCAGCCCCCTTATGGCCTCAGAGCCCCGATGCCTCCGACTTCTTGCCAGACACCCAGTTATTCCCTCACTTCACAGAGCTGCTCCTACCCCTAGACCCCTTGGAGGGATCCTCAGTCTCCACCATGACCTCTCAGTACCAAGAAGGGGATGACTCTATGGGCAAAAAACACTCAGGGTCTCAGCCCCAAGAGGAGGGTGGCTCTGTGAATGAAAATCACTCAGGCCCCAGGTTATTACTGGATTTATAG
Amino sequence
MDEAGNHHSEQTITRTENQTPHALAHRRMGPCLSCSQLYSQYLGLSQTHSSPPLALDPPRRQRQERTVYTESQQKVLEFYFQKDQYPNYDQRLNLAEMLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPSGILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEGSSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL*