ENST00000597836.5 OCEL1

Information
Transcript ID
ENST00000597836.5
Genome
hg38
Position
chr19:17,226,615-17,229,165
Strand
+
CDS length
627
Amino acid length
209
Gene symbol
OCEL1
Gene type
protein-coding
Gene description
occludin/ELL domain containing 1
Gene Entrez Gene ID
79629
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 17,226,615 17,226,869
2 17,226,994 17,227,199
3 17,227,840 17,228,005
4 17,228,256 17,228,309
5 17,228,803 17,229,165
CDS
Exon number Type Start Stop
1 CDS 17,226,792 17,226,869
2 CDS 17,226,994 17,227,199
3 CDS 17,227,840 17,228,005
4 CDS 17,228,256 17,228,309
5 CDS 17,228,803 17,228,925
Other genome
Genome Chromosome Start End Links
hg19 chr19 17,337,424 17,339,974 Link
CDS sequence
ATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCCGGGGGCACCTGCATACTCACCCGCCTGGGCCTGGGCCCCCGCTGCAGGGACTGGCGCCCCGAGGCCTCAAAACCAGCGCCCCCCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGGGAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTGGAGGCCCTGCTGAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAA
Amino sequence
MPTREPPKTRGSRGHLHTHPPGPGPPLQGLAPRGLKTSAPRPPCQPQPGPHKAKTKKIVFEDELLSQALLGAKKPIGAIPKGHKPRPHPVPDYELKYPPVSSERERSRYVAVFQDQYGEFLELQHEVGCAQAKLRQLEALLSSLPPPQSQKEAQVAARVWREFEMKRMDPGFLDKQARCHYLKGKLRHLKTQIQKFDDQGDSEGSVYF*