ENST00000597836.5 OCEL1

Information
Transcript ID
ENST00000597836.5
Genome
hg19
Position
chr19:17,337,424-17,339,974
Strand
+
CDS length
627
Amino acid length
209
Gene symbol
OCEL1
Gene type
protein-coding
Gene description
occludin/ELL domain containing 1
Gene Entrez Gene ID
79629
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 17,337,424 17,337,678
2 17,337,803 17,338,008
3 17,338,649 17,338,814
4 17,339,065 17,339,118
5 17,339,612 17,339,974
CDS
Exon number Type Start Stop
1 CDS 17,337,601 17,337,678
2 CDS 17,337,803 17,338,008
3 CDS 17,338,649 17,338,814
4 CDS 17,339,065 17,339,118
5 CDS 17,339,612 17,339,734
Other genome
Genome Chromosome Start End Links
hg38 chr19 17,226,615 17,229,165 Link
CDS sequence
ATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCCGGGGGCACCTGCATACTCACCCGCCTGGGCCTGGGCCCCCGCTGCAGGGACTGGCGCCCCGAGGCCTCAAAACCAGCGCCCCCCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAGCTTAAGTACCCGCCAGTGAGCAGTGAGAGGGAACGGAGCCGCTATGTCGCAGTGTTCCAGGACCAGTACGGAGAGTTCTTGGAGCTCCAGCACGAGGTGGGGTGTGCACAGGCAAAGCTCAGGCAGCTGGAGGCCCTGCTGAGCTCCCTGCCCCCACCCCAAAGCCAGAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGAAGCGAATGGATCCTGGCTTCCTGGACAAGCAGGCTCGCTGCCACTACCTGAAGGGTAAACTGAGGCATCTCAAGACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGGCTCCGTGTACTTCTAA
Amino sequence
MPTREPPKTRGSRGHLHTHPPGPGPPLQGLAPRGLKTSAPRPPCQPQPGPHKAKTKKIVFEDELLSQALLGAKKPIGAIPKGHKPRPHPVPDYELKYPPVSSERERSRYVAVFQDQYGEFLELQHEVGCAQAKLRQLEALLSSLPPPQSQKEAQVAARVWREFEMKRMDPGFLDKQARCHYLKGKLRHLKTQIQKFDDQGDSEGSVYF*