ENST00000331479.4 SMDT1

Information
Transcript ID
ENST00000331479.4
Genome
hg38
Position
chr22:42,079,700-42,084,284
Strand
+
CDS length
324
Amino acid length
108
Gene symbol
SMDT1
Gene type
protein-coding
Gene description
single-pass membrane protein with aspartate rich tail 1
Gene Entrez Gene ID
91689
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 42,079,700 42,079,954
2 42,081,925 42,082,065
3 42,083,119 42,084,284
CDS
Exon number Type Start Stop
1 CDS 42,079,769 42,079,954
2 CDS 42,081,925 42,082,062
Other genome
Genome Chromosome Start End Links
hg19 chr22 42,475,704 42,480,288 Link
CDS sequence
ATGGCGTCCGGAGCGGCTCGCTGGCTAGTATTGGCACCCGTCAGGTCCGGGGCTCTCCGGAGCGGGCCTAGCTTGAGGAAAGATGGCGATGTCTCCGCCGCATGGAGCGGCTCAGGCCGGAGCCTGGTACCGTCGAGGTCAGTCATCGTTACCCGCAGCGGCGCCATTTTGCCCAAACCGGTGAAAATGTCCTTCGGCCTTCTCCGTGTGTTCTCCATTGTGATCCCCTTTCTCTATGTCGGGACACTCATTAGCAAGAACTTTGCTGCTCTACTTGAGGAACATGACATTTTTGTTCCAGAGGATGATGATGATGATGACTAA
Amino sequence
MASGAARWLVLAPVRSGALRSGPSLRKDGDVSAAWSGSGRSLVPSRSVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVPEDDDDDD*