ENST00000331479.4 SMDT1

Information
Transcript ID
ENST00000331479.4
Genome
hg19
Position
chr22:42,475,704-42,480,288
Strand
+
CDS length
324
Amino acid length
108
Gene symbol
SMDT1
Gene type
protein-coding
Gene description
single-pass membrane protein with aspartate rich tail 1
Gene Entrez Gene ID
91689
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 42,475,704 42,475,958
2 42,477,929 42,478,069
3 42,479,123 42,480,288
CDS
Exon number Type Start Stop
1 CDS 42,475,773 42,475,958
2 CDS 42,477,929 42,478,066
Other genome
Genome Chromosome Start End Links
hg38 chr22 42,079,700 42,084,284 Link
CDS sequence
ATGGCGTCCGGAGCGGCTCGCTGGCTAGTATTGGCACCCGTCAGGTCCGGGGCTCTCCGGAGCGGGCCTAGCTTGAGGAAAGATGGCGATGTCTCCGCCGCATGGAGCGGCTCAGGCCGGAGCCTGGTACCGTCGAGGTCAGTCATCGTTACCCGCAGCGGCGCCATTTTGCCCAAACCGGTGAAAATGTCCTTCGGCCTTCTCCGTGTGTTCTCCATTGTGATCCCCTTTCTCTATGTCGGGACACTCATTAGCAAGAACTTTGCTGCTCTACTTGAGGAACATGACATTTTTGTTCCAGAGGATGATGATGATGATGACTAA
Amino sequence
MASGAARWLVLAPVRSGALRSGPSLRKDGDVSAAWSGSGRSLVPSRSVIVTRSGAILPKPVKMSFGLLRVFSIVIPFLYVGTLISKNFAALLEEHDIFVPEDDDDDD*