ENST00000222275.3 UPK1A

Information
Transcript ID
ENST00000222275.3
Genome
hg38
Position
chr19:35,666,517-35,678,481
Strand
+
CDS length
777
Amino acid length
259
Gene symbol
UPK1A
Gene type
protein-coding
Gene description
uroplakin 1A
Gene Entrez Gene ID
11045
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 35,666,517 35,666,538
2 35,666,809 35,666,896
3 35,668,454 35,668,654
4 35,673,232 35,673,306
5 35,673,438 35,673,545
6 35,675,840 35,676,019
7 35,677,812 35,677,895
8 35,677,975 35,678,481
CDS
Exon number Type Start Stop
2 CDS 35,666,813 35,666,896
3 CDS 35,668,454 35,668,654
4 CDS 35,673,232 35,673,306
5 CDS 35,673,438 35,673,545
6 CDS 35,675,840 35,676,019
7 CDS 35,677,812 35,677,895
8 CDS 35,677,975 35,678,019
Other genome
Genome Chromosome Start End Links
hg19 chr19 36,157,419 36,169,383 Link
CDS sequence
ATGGCGTCTGCGGCAGCAGCGGAGGCCGAGAAGGGATCTCCAGTTGTGGTGGGCCTGCTAGTTGTGGGCAATATCATTATTCTGCTGTCAGGCCTGTCCCTGTTTGCTGAGACCATATGGGTGACAGCCGACCAGTACCGTGTATACCCACTGATGGGAGTCTCAGGCAAGGATGACGTCTTCGCTGGTGCCTGGATTGCCATCTTCTGCGGCTTCTCCTTCTTCATGGTAGCCAGTTTTGGTGTGGGTGCCGCACTCTGCCGCCGCCGGTCCATGGTCCTCACGTACCTGGTGCTCATGCTCATCGTCTACATCTTCGAGTGCGCCTCCTGCATCACGTCCTACACCCACCGTGACTACATGGTGTCCAACCCATCCCTGATCACCAAGCAGATGCTGACCTTCTACAGCGCGGACACCGACCAGGGCCAGGAGCTGACCCGCCTCTGGGACCGCGTCATGATTGAGCAAGAATGCTGTGGCACATCTGGTCCCATGGACTGGGTGAACTTCACGTCAGCCTTCCGGGCGGCCACTCCGGAGGTGGTGTTCCCCTGGCCCCCACTGTGCTGTCGCCGGACGGGAAACTTCATCCCCCTCAACGAGGAGGGCTGCCGCCTGGGGCACATGGACTACCTGTTCACCAAGGGCTGCTTCGAACACATCGGCCACGCCATCGACAGCTACACGTGGGGTATCTCGTGGTTTGGGTTTGCCATCCTGATGTGGACGCTCCCGGTCATGCTGATAGCCATGTATTTCTACACCATGCTCTGA
Amino sequence
MASAAAAEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTML*