ENST00000222275.3 UPK1A

Information
Transcript ID
ENST00000222275.3
Genome
hg19
Position
chr19:36,157,419-36,169,383
Strand
+
CDS length
777
Amino acid length
259
Gene symbol
UPK1A
Gene type
protein-coding
Gene description
uroplakin 1A
Gene Entrez Gene ID
11045
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 36,157,419 36,157,440
2 36,157,711 36,157,798
3 36,159,356 36,159,556
4 36,164,134 36,164,208
5 36,164,340 36,164,447
6 36,166,742 36,166,921
7 36,168,714 36,168,797
8 36,168,877 36,169,383
CDS
Exon number Type Start Stop
2 CDS 36,157,715 36,157,798
3 CDS 36,159,356 36,159,556
4 CDS 36,164,134 36,164,208
5 CDS 36,164,340 36,164,447
6 CDS 36,166,742 36,166,921
7 CDS 36,168,714 36,168,797
8 CDS 36,168,877 36,168,921
Other genome
Genome Chromosome Start End Links
hg38 chr19 35,666,517 35,678,481 Link
CDS sequence
ATGGCGTCTGCGGCAGCAGCGGAGGCCGAGAAGGGATCTCCAGTTGTGGTGGGCCTGCTAGTTGTGGGCAATATCATTATTCTGCTGTCAGGCCTGTCCCTGTTTGCTGAGACCATATGGGTGACAGCCGACCAGTACCGTGTATACCCACTGATGGGAGTCTCAGGCAAGGATGACGTCTTCGCTGGTGCCTGGATTGCCATCTTCTGCGGCTTCTCCTTCTTCATGGTAGCCAGTTTTGGTGTGGGTGCCGCACTCTGCCGCCGCCGGTCCATGGTCCTCACGTACCTGGTGCTCATGCTCATCGTCTACATCTTCGAGTGCGCCTCCTGCATCACGTCCTACACCCACCGTGACTACATGGTGTCCAACCCATCCCTGATCACCAAGCAGATGCTGACCTTCTACAGCGCGGACACCGACCAGGGCCAGGAGCTGACCCGCCTCTGGGACCGCGTCATGATTGAGCAAGAATGCTGTGGCACATCTGGTCCCATGGACTGGGTGAACTTCACGTCAGCCTTCCGGGCGGCCACTCCGGAGGTGGTGTTCCCCTGGCCCCCACTGTGCTGTCGCCGGACGGGAAACTTCATCCCCCTCAACGAGGAGGGCTGCCGCCTGGGGCACATGGACTACCTGTTCACCAAGGGCTGCTTCGAACACATCGGCCACGCCATCGACAGCTACACGTGGGGTATCTCGTGGTTTGGGTTTGCCATCCTGATGTGGACGCTCCCGGTCATGCTGATAGCCATGTATTTCTACACCATGCTCTGA
Amino sequence
MASAAAAEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTML*