ENST00000539589.5 PACSIN3

Information
Transcript ID
ENST00000539589.5
Genome
hg38
Position
chr11:47,177,540-47,185,881
Strand
-
CDS length
1,275
Amino acid length
425
Gene symbol
PACSIN3
Gene type
protein-coding
Gene description
protein kinase C and casein kinase substrate in neurons 3
Gene Entrez Gene ID
29763
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 47,177,540 47,178,046
10 47,178,366 47,178,487
9 47,178,894 47,179,030
8 47,179,159 47,179,279
7 47,179,411 47,179,586
6 47,180,186 47,180,341
5 47,180,455 47,180,690
4 47,182,403 47,182,559
3 47,182,674 47,182,764
2 47,183,004 47,183,069
1 47,185,642 47,185,881
CDS
Exon number Type Start Stop
11 CDS 47,177,931 47,178,046
10 CDS 47,178,366 47,178,487
9 CDS 47,178,894 47,179,030
8 CDS 47,179,159 47,179,279
7 CDS 47,179,411 47,179,586
6 CDS 47,180,186 47,180,341
5 CDS 47,180,455 47,180,690
4 CDS 47,182,403 47,182,559
3 CDS 47,182,674 47,182,727
Other genome
Genome Chromosome Start End Links
hg19 chr11 47,199,091 47,207,432 Link
CDS sequence
ATGGCTCCAGAAGAGGACGCTGGAGGGGAGGCCTTAGGGGGCAGTTTCTGGGAGGCTGGCAACTACAGGCGCACGGTACAGCGGGTGGAGGACGGGCACCGGCTGTGCGGGGACCTGGTCAGCTGCTTCCAGGAGCGCGCCCGCATCGAGAAGGCTTATGCCCAGCAGTTGGCTGACTGGGCCCGAAAGTGGAGGGGGACCGTGGAGAAGGGCCCCCAGTATGGCACACTGGAGAAGGCCTGGCATGCCTTTTTCACGGCGGCTGAGCGGCTGAGCGCGCTGCACCTGGAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGAGCGGGTGCGCGCCTGGCAGCGGGGGGCTTTCCACCGGCCTGTGCTGGGCGGCTTCCGCGAGAGCCGGGCGGCCGAGGACGGCTTCCGCAAGGCCCAGAAGCCCTGGCTGAAGAGGCTGAAGGAGGTTGAGGCTTCCAAGAAAAGCTACCACGCAGCCCGGAAGGATGAGAAGACCGCCCAGACGAGGGAGAGCCACGCAAAGGCAGACAGCGCCGTCTCCCAGGAGCAGCTGCGCAAACTGCAGGAACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGACAAAAGCTCAGTATGAGCAGACGCTGGCAGAGCTGCATCGCTACACTCCACGCTACATGGAGGACATGGAACAGGCCTTTGAGACCTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATGAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCGCAGCACCCACGGGCCAGGCATGGCCATGAACTGGCCACAGTTCGAGGAGTGGTCCTTGGACACACAGAGGACAATCAGCCGGAAAGAGAAGGGTGGCCGGAGCCCTGATGAGGTTACCCTGACCAGCATTGTGCCTACAAGAGATGGCACCGCACCCCCACCCCAGTCCCCGGGGTCCCCAGGCACGGGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCTGATGAGCTGAGCTTCCGAGCAGGGGAGGAGCTGCTGAAGATGAGTGAGGAGGACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAGTGGCCGCATTGGCCTGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGA
Amino sequence
MAPEEDAGGEALGGSFWEAGNYRRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRGTVEKGPQYGTLEKAWHAFFTAAERLSALHLEVREKLQGQDSERVRAWQRGAFHRPVLGGFRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHAARKDEKTAQTRESHAKADSAVSQEQLRKLQERVERCAKEAEKTKAQYEQTLAELHRYTPRYMEDMEQAFETCQAAERQRLLFFKDMLLTLHQHLDLSSSEKFHELHRDLHQGIEAASDEEDLRWWRSTHGPGMAMNWPQFEEWSLDTQRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEADELSFRAGEELLKMSEEDEQGWCQGQLQSGRIGLYPANYVECVGA*