ENST00000539589.5 PACSIN3

Information
Transcript ID
ENST00000539589.5
Genome
hg19
Position
chr11:47,199,091-47,207,432
Strand
-
CDS length
1,275
Amino acid length
425
Gene symbol
PACSIN3
Gene type
protein-coding
Gene description
protein kinase C and casein kinase substrate in neurons 3
Gene Entrez Gene ID
29763
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 47,199,091 47,199,597
10 47,199,917 47,200,038
9 47,200,445 47,200,581
8 47,200,710 47,200,830
7 47,200,962 47,201,137
6 47,201,737 47,201,892
5 47,202,006 47,202,241
4 47,203,954 47,204,110
3 47,204,225 47,204,315
2 47,204,555 47,204,620
1 47,207,193 47,207,432
CDS
Exon number Type Start Stop
11 CDS 47,199,482 47,199,597
10 CDS 47,199,917 47,200,038
9 CDS 47,200,445 47,200,581
8 CDS 47,200,710 47,200,830
7 CDS 47,200,962 47,201,137
6 CDS 47,201,737 47,201,892
5 CDS 47,202,006 47,202,241
4 CDS 47,203,954 47,204,110
3 CDS 47,204,225 47,204,278
Other genome
Genome Chromosome Start End Links
hg38 chr11 47,177,540 47,185,881 Link
CDS sequence
ATGGCTCCAGAAGAGGACGCTGGAGGGGAGGCCTTAGGGGGCAGTTTCTGGGAGGCTGGCAACTACAGGCGCACGGTACAGCGGGTGGAGGACGGGCACCGGCTGTGCGGGGACCTGGTCAGCTGCTTCCAGGAGCGCGCCCGCATCGAGAAGGCTTATGCCCAGCAGTTGGCTGACTGGGCCCGAAAGTGGAGGGGGACCGTGGAGAAGGGCCCCCAGTATGGCACACTGGAGAAGGCCTGGCATGCCTTTTTCACGGCGGCTGAGCGGCTGAGCGCGCTGCACCTGGAGGTGCGGGAGAAGCTGCAAGGGCAGGACAGTGAGCGGGTGCGCGCCTGGCAGCGGGGGGCTTTCCACCGGCCTGTGCTGGGCGGCTTCCGCGAGAGCCGGGCGGCCGAGGACGGCTTCCGCAAGGCCCAGAAGCCCTGGCTGAAGAGGCTGAAGGAGGTTGAGGCTTCCAAGAAAAGCTACCACGCAGCCCGGAAGGATGAGAAGACCGCCCAGACGAGGGAGAGCCACGCAAAGGCAGACAGCGCCGTCTCCCAGGAGCAGCTGCGCAAACTGCAGGAACGGGTGGAACGCTGTGCCAAGGAGGCCGAGAAGACAAAAGCTCAGTATGAGCAGACGCTGGCAGAGCTGCATCGCTACACTCCACGCTACATGGAGGACATGGAACAGGCCTTTGAGACCTGCCAGGCCGCCGAGCGCCAGCGGCTTCTTTTCTTCAAGGATATGCTGCTCACCTTACACCAGCACCTGGACCTTTCCAGCAGTGAGAAGTTCCATGAACTCCACCGTGACTTGCACCAGGGCATTGAGGCAGCCAGTGACGAAGAGGATCTGCGCTGGTGGCGCAGCACCCACGGGCCAGGCATGGCCATGAACTGGCCACAGTTCGAGGAGTGGTCCTTGGACACACAGAGGACAATCAGCCGGAAAGAGAAGGGTGGCCGGAGCCCTGATGAGGTTACCCTGACCAGCATTGTGCCTACAAGAGATGGCACCGCACCCCCACCCCAGTCCCCGGGGTCCCCAGGCACGGGGCAGGATGAGGAGTGGTCAGATGAAGAGAGTCCCCGGAAGGCTGCCACCGGGGTTCGGGTGAGGGCACTCTATGACTACGCTGGCCAGGAAGCTGATGAGCTGAGCTTCCGAGCAGGGGAGGAGCTGCTGAAGATGAGTGAGGAGGACGAGCAGGGCTGGTGCCAAGGCCAGTTGCAGAGTGGCCGCATTGGCCTGTACCCTGCCAACTACGTGGAGTGTGTGGGCGCCTGA
Amino sequence
MAPEEDAGGEALGGSFWEAGNYRRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRGTVEKGPQYGTLEKAWHAFFTAAERLSALHLEVREKLQGQDSERVRAWQRGAFHRPVLGGFRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHAARKDEKTAQTRESHAKADSAVSQEQLRKLQERVERCAKEAEKTKAQYEQTLAELHRYTPRYMEDMEQAFETCQAAERQRLLFFKDMLLTLHQHLDLSSSEKFHELHRDLHQGIEAASDEEDLRWWRSTHGPGMAMNWPQFEEWSLDTQRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEADELSFRAGEELLKMSEEDEQGWCQGQLQSGRIGLYPANYVECVGA*